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View Structure Prediction Details

Protein: CE28809
Organism: Caenorhabditis elegans
Length: 321 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE28809.

Description E-value Query
Range
Subject
Range
gi|73984592 - gi|73984592|ref|XP_533739.2| PREDICTED: similar to Y71F9B.2 isoform 1 [Canis familiaris]
475.0 [0..3] [320..12]

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Predicted Domain #1
Region A:
Residues: [1-90]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDEYRELISV LPLETVEYAF AYGSGAIQQQ NEDKSEKMVD FVIVTKNAQE FHRDNILKNP  60
   61 QHYSLLRLMG PKMIEKIQCN FAARVYYNTH 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [91-321]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VKVGKRKIKY GVISYENVKQ DLLDWRWIYI SGRLHKPVLE VIKPRQDMCD LVTENRRSAL  60
   61 HSSLLLLPES FTLKQLFHKI VGLSYTGDFR MVVGEDKNKI NKIVEGNYEE LLRVYEPLMN 120
  121 DDARLSVMSP AKLIQDGSTT AIYHRLNLLP SEVLNRIQKN MNRVQKRQRD AEEVIFSLAH 180
  181 RHDVAATVET AIGGIIRPVS LSQTAKNAFS AGVTRSIIYS MAKMSKFLKS K

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


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