| Protein: | exo-1 |
| Organism: | Caenorhabditis elegans |
| Length: | 639 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for exo-1.
| Description | E-value | Query Range |
Subject Range |
|
|
313.0 | [0..1] | [638..1] |
|
Region A: Residues: [1-374] |
1 11 21 31 41 51
| | | | | |
1 MGISGLLPFV KNACRKGNIL ELRGKSVAID VSCLLHRGLT GCMDKIHMGE ETQSYVNYVN 60
61 KYVKELLGMG CHVVMVFDGR PLPAKKGTNE ERRELREKRK EHAEMLLAKG LEREARDTYR 120
121 LATSISADIV ENTIQYFRSM TNVDIVVAPY EADAQLAYLV QEKLVDAVIT EDSDLIVFGC 180
181 EMIYFKWQSA TGECSVYEKC NLKNCFTGEL GGDKFDFVKF RRICILSGCD YLQAGLPGVG 240
241 LSTAAKFFSM TSIKDLRTLL RKVPSYLKNP KLKEHVNDEF IRNFEKAENT FKHQIVFDPR 300
301 ERCQKPLTPY PKEVLMTGVD DLEEVIDLDS PKKTAPSSKS FAYAGTASTQ RIAIRLALGN 360
361 PENKSSIDDQ FLLV
|
| Detection Method: |  |
| Confidence: | 62.221849 |
| Match: | 1ul1X |
| Description: | Crystal structure of the human FEN1-PCNA complex |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| catalytic activity | 0.845290320008287 | bayes_pls_golite062009 |
| hydrolase activity | 0.31554871338907 | bayes_pls_golite062009 |
| hydrolase activity, acting on ester bonds | 0.12799711467808 | bayes_pls_golite062009 |
| nuclease activity | 0.0878151841480506 | bayes_pls_golite062009 |
|
Region A: Residues: [375-479] |
1 11 21 31 41 51
| | | | | |
1 QPTPEWSVWG LRYESKGSTL DKISKQKELE ATQCGGAFKL DSPSVKRVKV ASKTTPNDDE 60
61 DDIVKQFMAD IEKEKKAIKK RKNAPQVDYN ADVLLKKYAE PPPEK
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [480-639] |
1 11 21 31 41 51
| | | | | |
1 RQKILEVIDD DFSEFFQEKV KENTKESVAE EKVENSNEEL KPPPILRKAV STPDSARKTH 60
61 KFQSPLLNHQ NSAPPSLPDR KPAQTSKYFS KPTSENGVPK TKNPFRCPAF VKPTQKVEEK 120
121 IEKTTILAAL EENSVPMPSS NTTYRFVGFK SAGLRRKSKQ
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
