| Protein: | gld-3 |
| Organism: | Caenorhabditis elegans |
| Length: | 603 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gld-3.
| Description | E-value | Query Range |
Subject Range |
|
|
420.0 | [0..1] | [600..1] |
|
Region A: Residues: [1-205] |
1 11 21 31 41 51
| | | | | |
1 MGEQSHEKDH DEAHSYNPFV RSAVEYDADT RLQMAENAAS ARKLFVSSAL KDIIVNPENF 60
61 YHDFQQSAQM AEDANQRRQV SYNTKREAHI HQLKAQGLPL PSNIPMIEIN PTRVTLNMEF 120
121 ESQYYSLMTS DNGDHENVAS IMAETNTLIQ LPDRSVGGTT PDPFAQQVTI TGYFGDVDRA 180
181 RMLMRRNCHF TVFMALSKMK MPLHE
|
| Detection Method: |  |
| Confidence: | 9.0 |
| Match: | 1e3hA |
| Description: | Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3; Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domains 1 and 4; Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 6; Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domains 2 and 5 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [206-261] |
1 11 21 31 41 51
| | | | | |
1 LQAHVRQNPI QNVEMSFVDA PEKNGIVTTY LRITAREKNQ HELIEAAKRL NEILFR
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [262-420] |
1 11 21 31 41 51
| | | | | |
1 ESPAPENNFT LHFTLSTYYV DQVLGSSSTA QLMPVIERET TTIISYPCYN NRNETRGNIY 60
61 EIKVVGNIDN VLKARRYIMD LLPISMCFNI KNTDMAEPSR VSDRNIHMII DESGIILKMT 120
121 PSVYEPADLL SGEVPLNCAS LRSKEFNIKK LYTAYQKVL
|
| Detection Method: | |
| Confidence: | 22.0 |
| Match: | 2annA |
| Description: | No description for 2annA was found. |
|
Region A: Residues: [421-603] |
1 11 21 31 41 51
| | | | | |
1 SKKFDFIAPQ PNDYDNSIWH HSLPANFLKN FNMPCRGELS DGSNGRRHRS SSIASSRSKH 60
61 SYMSKGKQFS ESSGGPSRSH TRVSSFSENS STVPIMQFPT PHFAPPMLTP HHHMLKYVYL 120
121 QQHQQAQTFL KGAAGLHPGT HIMFPPPIIV DGSFGARYSS NIYPFSYIVP QNFNFLNGNF 180
181 GHL
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
