| Protein: | CE28553 |
| Organism: | Caenorhabditis elegans |
| Length: | 583 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE28553.
| Description | E-value | Query Range |
Subject Range |
|
|
558.0 | [0..18] | [583..107] |
|
Region A: Residues: [1-150] |
1 11 21 31 41 51
| | | | | |
1 MDNKEKEDEE LSDELKDQPG PSEKPRTPTV VAFTKPSFYR VNTVISDVKV CRSMSYDMCG 60
61 NHQQELLFDL YKDETTGKVY LPRFFKALLE SGIRKDDPRI DKMIQNIKDA DLLDDFVWGT 120
121 QHIYLEKDTF KRYIGSSIGV VTKALKKQMI
|
| Detection Method: |  |
| Confidence: | 1.0 |
| Match: | 1ej3A |
| Description: | Calcium-regulated photoprotein |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [151-239] |
1 11 21 31 41 51
| | | | | |
1 IPDWERFVSD MGEIFEDVRS HNEGDLATYI PQLSRVAPDS WAMSVCTIDG QRKMWGDALK 60
61 PFCLQSVSKP FTYALVHDDI GPEELHAHV
|
| Detection Method: | |
| Confidence: | 64.045757 |
| Match: | 2pbyA |
| Description: | No description for 2pbyA was found. |
|
Region A: Residues: [240-583] |
1 11 21 31 41 51
| | | | | |
1 GQEPSGRLFN DISLDHNKKP HNPLINAGAI VVASLLKNKL PLADRFDFMI HACRKFVGSG 60
61 YIGFDNSVFL SERETADRNY ALSYYMREHK VFPKDLNLQD TLDLYFQICS IETNCDSLAV 120
121 MAATLANGGV NPMNGERIVN NRACRDTLSL MYSCGMYDWS GQFAFHVGLP AKSGVSGDMI 180
181 IVIPNVMGIA LYSPRLDKLG NTVRGVKFAE QLVQKYNFHN YDSLIYSDNK KIDPRRQLKD 240
241 DHDGQNRFMY ATKLGDIAAI KRFLLMGHDI HCKDYDDRTV LHVAAAEGDV VTLEYVLSKW 300
301 QEDPNPCDRY DRTPLDDAKH FNHTACVKLL EEAITVYNLK GQDD
|
| Detection Method: | |
| Confidence: | 63.0 |
| Match: | 1n11A |
| Description: | Ankyrin-R |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 1.69518662254742 | bayes_pls_golite062009 |
| protein binding | 1.62940095931841 | bayes_pls_golite062009 |
| transcription factor binding | 0.16045567443462 | bayes_pls_golite062009 |
