| Protein: | ser-1 |
| Organism: | Caenorhabditis elegans |
| Length: | 683 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
|
Region A: Residues: [1-338] |
1 11 21 31 41 51
| | | | | |
1 MLIELFSHSA PPEDPYYVPA NESFATTALT PHFSTTSVWS IRVQLIPTMG IYHFNGVALF 60
61 LLPVLCLIGL IGNFLVCVAI ATDRRLHNVT NYFLFSLALA DLLVCCIVMP LSIVVEVRHG 120
121 VWTWSVSMCL LYVYSDVFLC SASIVHMSVI SLDRYLGISQ PLRTRNRSKT LIFIKIAIVW 180
181 VVTLLVSCPI AVLAMHDTAN ILRNNQCMIF SRYYIIYGST MTFLIPLCIM GVTYAKTTQL 240
241 LNKQASILSQ KAGDKFNGNG LRRTMPHRKL GYARTYSATV NGTIANGKAI GAHGRTMSSI 300
301 SNIANGETAD RLGTSRPSIN TNGHKQLQKA STINKWKS
|
| Detection Method: |  |
| Confidence: | 52.0 |
| Match: | 1f88A |
| Description: | Rhodopsin |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [339-488] |
1 11 21 31 41 51
| | | | | |
1 RTSNLVTNFA NKVGRRSSLQ TATQDLANEH KATRVLAVVF ACFFICWTPF FFINFLIGFG 60
61 GENVQIPDWV ASIFLWLGYV SSTINPIIYT VFNKRFRQAF VRILRCQCFH PLRDSHQMYS 120
121 RNFTTTIVPD TYTCSRSNQE RTTSVITRDE
|
| Detection Method: | |
| Confidence: | 3.74 |
| Match: | 1f88A |
| Description: | Rhodopsin |
| Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [489-683] |
1 11 21 31 41 51
| | | | | |
1 TRSARSSERP EPSRARSEIS EEPVARTNGK LTSEKKKISL PSFPRVSSSR DSRATTEAST 60
61 TDEETKPLIP KSTVPATVIN IPEQLINPIK KSLTTIINMP LLDETIPEKA QVHHKSQTLL 120
121 TSSTLNFATF STCPQQPTRS YSCVDCKKAE KMLSSDVSDM MTTSTASTAS TVNGAPRKHL 180
181 TLFNHFDSAI KETFL
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
