| Protein: | vab-3 |
| Organism: | Caenorhabditis elegans |
| Length: | 296 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for vab-3.
| Description | E-value | Query Range |
Subject Range |
|
|
146.0 | [0..20] | [296..179] |
|
Region A: Residues: [1-122] |
1 11 21 31 41 51
| | | | | |
1 MISAHAPIVS IKAPLPTRRA STIRKTARVG KFSPYEDQKP PTEPEDDAAA RMRLKRKLQR 60
61 NRTSFTQVQI ESLEKEFERT HYPDVFARER LAQKIQLPEA RIQVWFSNRR AKWRREEKMR 120
121 NK
|
| Detection Method: |  |
| Confidence: | 21.69897 |
| Match: | 1fjlA |
| Description: | Paired protein |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [123-296] |
1 11 21 31 41 51
| | | | | |
1 RSSGTMDSSL SNGTPTPTPG SVTGSNMTNP IGSPASTPNR FPSNNSANLP TTNFVPQTSQ 60
61 MYAGLSQPAM DPYSFGIANG FSMAPYPQVT DFQPHHMFQG RSPYDFPYPR MPTNGHGFQQ 120
121 SMSPATTAVG DIPTLSSGMS LPVSAVLNSI DPSLTHSQMH ELSDLTQEHY WRPQ
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
