| Protein: | pie-1 |
| Organism: | Caenorhabditis elegans |
| Length: | 335 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for pie-1.
| Description | E-value | Query Range |
Subject Range |
|
|
166.0 | [0..1] | [335..1] |
|
Region A: Residues: [1-88] |
1 11 21 31 41 51
| | | | | |
1 MAQTKPIAEQ MAALNNSDDT SFAADRSNSL LNATCPARIQ NSVDQRKINR SFNDSLSSGY 60
61 SGKWLRPKRE ALKITPLAQI DEAPATKR
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [89-154] |
1 11 21 31 41 51
| | | | | |
1 HSSAKDKHTE YKTRLCDAFR REGYCPYNDN CTYAHGQDEL RVPRRRQEYY SRDPPRERRD 60
61 SRSRRD
|
| Detection Method: | |
| Confidence: | 13.69897 |
| Match: | 1rgoA |
| Description: | Structural Basis for Recognition of the mRNA Class II AU-Rich Element by the Tandem Zinc Finger Domain of TIS11d |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [155-223] |
1 11 21 31 41 51
| | | | | |
1 DVDTTINRSS SSASKHHDEN RRPSNNHGSS NRRQICHNFE RGNCRYGPRC RFIHVEQMQH 60
61 FNANATVYA
|
| Detection Method: | |
| Confidence: | 2.2 |
| Match: | 2e5sA |
| Description: | No description for 2e5sA was found. |
|
Region A: Residues: [224-335] |
1 11 21 31 41 51
| | | | | |
1 PPSSDCPPPI AYYHHHPQHQ QQFLPFPMPY FLAPPPQAQQ GAPFPVQYIP QQHDLMNSQP 60
61 MYAPMAPTYY YQPINSNGMP MMDVTIDPNA TGGAFEVFPD GFFSQPPPTI IS
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
