| Protein: | unc-49 |
| Organism: | Caenorhabditis elegans |
| Length: | 487 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for unc-49.
| Description | E-value | Query Range |
Subject Range |
|
|
356.0 | [0..1] | [487..1] |
|
Region A: Residues: [1-371] |
1 11 21 31 41 51
| | | | | |
1 MARPFTLIVL LSAHLCLHVV VTQDEDSHIN TQLLSSVLDR LTNRTTYDKR LRPRYGEKPV 60
61 DVGITIHVSS ISAVSEVDMD FTLDFYMRQT WQDPRLAFGS LDLGLSKEID SLTVGVDYLD 120
121 RLWKPDTFFP NEKKSFFHLA TTHNSFLRIE GDGTVYTSQR LTVTATCPMD LKLFPMDSQH 180
181 CKLEIESYGY ETKDIDYYWG KKRTDLEITA VKFDTFQLPQ FQPTLYFVNT TKAETSSGKY 240
241 VRLALEVILV RNMGFYTMNI VIPSILIVTI SWVSFWLNRE ASPARVGLGV TTVLTMTTLI 300
301 TTTNNSMPKV SYVKGLDVFL NFCFVMVFAS LLEYAIVSYM NKRLVLRREK RRKAAEQQQR 360
361 NEMPMFNASP K
|
| Detection Method: |  |
| Confidence: | 63.0 |
| Match: | 2bg9A |
| Description: | Refined structure of the nicotinic acetylcholine receptor at 4A resolution. |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [372-487] |
1 11 21 31 41 51
| | | | | |
1 AANNNADLYF AGHNSSMNPL MEIPENCDCR TIPMMQHPRL VTDGAHTLWP APFARPKKAS 60
61 KTCCQRWTPA KIDKLSRYGF PLSFSIFNIV YWLYMKYLSL NSSDKIQEND KWQQIH
|
| Detection Method: | |
| Confidence: | 31.69897 |
| Match: | 1oedA |
| Description: | Acetylcholine receptor protein, alpha chain |
Matching Structure (courtesy of the PDB): |
|
