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View Structure Prediction Details

Protein: osm-6
Organism: Caenorhabditis elegans
Length: 472 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for osm-6.

Description E-value Query
Range
Subject
Range
gi|73992472 - gi|73992472|ref|XP_853492.1| PREDICTED: similar to NGD5 protein homolog [Canis familiaris]
523.0 [0..7] [433..7]

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Predicted Domain #1
Region A:
Residues: [1-163]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPPFSDEKMT NRSIGRKVLI DQSKQQQISL ISGFRGVARH LKSVLTVEIN TEPINLNGLE  60
   61 DVRMLIIPQP KTSFGTGEIE AIWKFVEEGG SLMILSGEGG ERQSLNEMIA KYGITVNKDS 120
  121 VIRTVFLKYF DPKEALVANG VINRAIAVAA KKNVSTEQKH NSQ

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [164-267]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ALSFIYPYGC TLDVNNRMSN VVLSSGSTSF PTSRPVAAFH ETKLNEMKKK GRVCVVGSVS  60
   61 MFHDTYIDKE ENGKIFDTFV EFLVNGLELN TIDAAEPEIN DYTN

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [268-328]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 IPDHIHMSQQ IKVCMYEGEL DQAISSDFMK IMDTSLHSFN LKHWPMTIRL YEALNLSPPP  60
   61 L

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [329-472]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TLVEPQFELP MPPFQPAVFP PTFQELPMPP LELFDLDEQF SSPEIQLSQL ANRSEEEDLI  60
   61 FFIEKAGEIT GISAELTRSE RTPKKIIELA VSKLMLFKRS MMDGELEVAS AFDIGEHDAH 120
  121 HQSFNQGEEM DEQLFSDIDE FDDL

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


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