| Protein: | cas-2 |
| Organism: | Caenorhabditis elegans |
| Length: | 457 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for cas-2.
| Description | E-value | Query Range |
Subject Range |
|
|
694.0 | [0..1] | [456..1] |
|
Region A: Residues: [1-235] |
1 11 21 31 41 51
| | | | | |
1 MDPSVVSRLE NVANRTENIL LKYDSNKKET PVDATPQIIN LYDDAICENL VSFYDLSAKI 60
61 GGDLNRLGCM TRSLFFTHRY FLWIACGRKK ADNDEFATLV NDLSKEIVAF SDFKEKNRKS 120
121 EFYNHICGLE AAVGGFGWVA EPKTPAPFIK DAIDTSVFYL NRILMEHKGK NDFHSEWAKS 180
181 IKELMLSLHE YVRQHHTTGL VWNSDPGATP MCNRKSGGAP TPPPPPPPPI SLIAP
|
| Detection Method: |  |
| Confidence: | 64.221849 |
| Match: | 1tjfA |
| Description: | The crystal structure of the N-terminal domain of CAP indicates variable oligomerisation |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| actin binding | 5.81884714997094 | bayes_pls_golite062009 |
| cytoskeletal protein binding | 4.39652693178112 | bayes_pls_golite062009 |
| adenylate cyclase binding | 1.89694035952868 | bayes_pls_golite062009 |
| binding | 1.8340549733034 | bayes_pls_golite062009 |
| enzyme binding | 1.53072876683435 | bayes_pls_golite062009 |
| protein binding | 0.871734119777931 | bayes_pls_golite062009 |
|
Region A: Residues: [236-298] |
1 11 21 31 41 51
| | | | | |
1 SKPSGVGALL ESLNTGLSAT SRLKKVTPEM QTHKNPVLRE VNGQMNRKTE ERKVSENKKP 60
61 EKI
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [299-457] |
1 11 21 31 41 51
| | | | | |
1 HESSIFWDGK IWKVDHQVGN KNAVVEVTDK KESIYIYKCN DSIIKIKGKA NAITLDGCRK 60
61 TSVVFDGLVA QCEIINCQSI QIQTLGELPT VSIQKTDGCH IYLSRDALNA QIVASKSSEM 120
121 NISAMLEDGD DEYTEMALPE QFMTKIVGKK LVTVASEIV
|
| Detection Method: | |
| Confidence: | 73.09691 |
| Match: | 1k8fA |
| Description: | C-terminal domain of adenylylcyclase associated protein |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| actin binding | 4.94933252861141 | bayes_pls_golite062009 |
| cytoskeletal protein binding | 4.21664682046338 | bayes_pls_golite062009 |
| actin monomer binding | 2.04365563273836 | bayes_pls_golite062009 |
| binding | 1.57578562719958 | bayes_pls_golite062009 |
| adenylate cyclase binding | 0.947630973686921 | bayes_pls_golite062009 |
| enzyme binding | 0.705135358375 | bayes_pls_golite062009 |
| protein binding | 0.651719649953198 | bayes_pls_golite062009 |
