| Protein: | daf-12 |
| Organism: | Caenorhabditis elegans |
| Length: | 267 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for daf-12.
| Description | E-value | Query Range |
Subject Range |
|
|
214.0 | [0..8] | [266..345] |
|
Region A: Residues: [1-267] |
1 11 21 31 41 51
| | | | | |
1 MTPTHGFQYQ SDPYQVPPAE RNINYQLNAA ELKALDAVRE AFYGMDDPME QGRQMQSFLK 60
61 ANKTPADIMN IMDVTMRRFV KVAKGVPAFR EVSQEGKFSL LKGGMIEMLT VRGVTRYDAS 120
121 TNSFKTPTIK GQNVSVNVDD MFAKLNANAQ AQKAKCLEFF GFFDEEIKKN ELAVYLVMLA 180
181 VLFSVRSDPP MNENDVRIVT ERHNHFMSLL NRYLESLFGE QARRIFERIP KALGLLNEIA 240
241 RNAGMLFMGT VRSGEAEELP GEFFKIK
|
| Detection Method: |  |
| Confidence: | 53.39794 |
| Match: | 1lbdA |
| Description: | LIGAND-BINDING DOMAIN OF THE HUMAN NUCLEAR RECEPTOR RXR-ALPHA |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 1.15996699473685 | bayes_pls_golite062009 |
| transcription regulator activity | 0.46162010671465 | bayes_pls_golite062009 |
| protein binding | 0.33427459029264 | bayes_pls_golite062009 |
| nucleic acid binding | 0.15459949087509 | bayes_pls_golite062009 |
| DNA binding | 0.14395376162921 | bayes_pls_golite062009 |
