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View Structure Prediction Details

Protein: ath-1
Organism: Caenorhabditis elegans
Length: 223 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ath-1.

Description E-value Query
Range
Subject
Range
gi|109086409 - gi|109086409|ref|XP_001083287.1| PREDICTED: lysophospholipase I isoform 2 [Macaca mulatta]
154.0 [0..4] [221..6]

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Predicted Domain #1
Region A:
Residues: [1-223]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSAVSNGNPS IVSPRGEHKG TLIFLHGLGD QGHGWADAFK TEAKHDNIKF ICPHSSERPV  60
   61 TLNMGMRMPA WFDLFGLDPN AQEDEQGINR ATQYVHQLID AEVAAGIPAS RIAVGGFSMG 120
  121 GALAIYAGLT YPQKLGGIVG LSSFFLQRTK FPGSFTANNA TPIFLGHGTD DFLVPLQFGQ 180
  181 MSEQYIKKFN PKVELHTYRG MQHSSCGEEM RDVKTFLSAH IAH

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 36.522879
Match: 1fj2A
Description: Acyl protein thioesterase 1
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
hydrolase activity 2.24106351016868 bayes_pls_golite062009
catalytic activity 1.39629727416851 bayes_pls_golite062009
hydrolase activity, acting on ester bonds 1.09488027320166 bayes_pls_golite062009
lipase activity 0.849473630399459 bayes_pls_golite062009
carboxylesterase activity 0.424330502936163 bayes_pls_golite062009
palmitoyl-(protein) hydrolase activity 0.277033874372149 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle