| Protein: | dnj-25 |
| Organism: | Caenorhabditis elegans |
| Length: | 784 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for dnj-25.
| Description | E-value | Query Range |
Subject Range |
|
|
867.0 | [0..1] | [784..1] |
|
Region A: Residues: [1-238] |
1 11 21 31 41 51
| | | | | |
1 MVFDEEPPAQ KKWTQQATTS AFGLMESLKG QGSSLAKNLK NFGKSLVKEH KSQGATTPPE 60
61 HRDDDIRLTW LTNRIVLADT LHKSKEGLLK AETAVVREMI DCQPYVVVNV HAEPLKLDGY 120
121 AKSVHVPLGS AAKGGLPKYP TIQALVPILN EYCLLTNDAA IVIFGNDENV QITAAFCLIA 180
181 SRTISRVSEF MSDSLPNRFD RLPVTYHLFL EQTKHVCKYH ARRQQLQSGA ILNQIILE
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [239-353] |
1 11 21 31 41 51
| | | | | |
1 PGTLLIDGDL YVAIQQGINQ LKVVEFSANS CRNRQGQLVF NMESTETVDD VVIFLGKKSD 60
61 VKHPILASKF NTQLLHSEDS SIIFTSSEMD VSKMIASAMP VQDLRMIVNF ATRRM
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [354-605] |
1 11 21 31 41 51
| | | | | |
1 PTLNTFQFDR YKLLCVRNDR ELDGYQRSYG DVDSEDESPI LRSARSKSGT KAAETSSSQG 60
61 NFFDSLQFED RQEPHHFREQ RDSTLLDHHD DVTHHTADLL DGFTIGGTEK LSPANETPIL 120
121 SAPTPASSDY DSMTSSQNRR NPSPATAIDD LLGLGTETSA PAPAPSTHFN NSSSGANLVD 180
181 FDLGAPIKPT SSASNLSTAS PATSSWSNTD LLGGFSPMKP QTTSTPPNTR NPSASNSKPV 240
241 SQVNSQADFE AF
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [606-784] |
1 11 21 31 41 51
| | | | | |
1 LSNYPEQRQA APQNTQNVSQ KTQQTRPQNT YKPAFGDAAT GSAKVSMDAF SDLLNQGGFK 60
61 PTQRENQKQS IGNMLKVEQS KNLTPEEIQI RDWTQGKERN IRALLGSLHN VLWEGADRWN 120
121 QPSMGDLLTP DQIKKHYRKA CLVVHPDKLT GSPHLSLAKM AFTELNDAYS KYQNDPAAM
|
| Detection Method: | |
| Confidence: | 57.09691 |
| Match: | 1n4cA |
| Description: | NMR Structure of the J-Domain and Clathrin Substrate Binding Domain of Bovine Auxilin |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 1.09328326353746 | bayes_pls_golite062009 |
| protein binding | 0.79106795097001 | bayes_pls_golite062009 |
