| Protein: | hcf-1 |
| Organism: | Caenorhabditis elegans |
| Length: | 782 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for hcf-1.
| Description | E-value | Query Range |
Subject Range |
|
|
375.0 | [0..25] | [748..4] |
|
Region A: Residues: [1-378] |
1 11 21 31 41 51
| | | | | |
1 MDEDVGLEAT NYSRGDESRS EEQEKNVVRW RIVQQSTGPN PKPRHGHRAV VLKELIVIFG 60
61 GGNEGMIDEL HAYNTQKREW TAPQCCGDVP TPAAAFGAIS LGNKIYRFGG MTEYGKYTND 120
121 LYELQSTRWE WRRLNPRVHS NGHLPCPRIG HSFVVSQKSQ KAYVFGGLSN DLNDPKRNVP 180
181 HYLDDLYVIN LSGPQHLIWE KLNATGPGPI SRESHTAVIY EKDSISRMVV YGGMNGVRLG 240
241 DLWYLNLNTL HWTEIKFDDP RTGIPPMPRS LHSSVLIGDK MFVYGGWVPL LEHASTEQQT 300
301 EKEWKCTSSL GCWNITEDRW VPLHLYCSDE DTIPRGRAGH CAAAVGDRMY IWSGRDGYRK 360
361 AWSNQVCCRD MWLLDTIL
|
| Detection Method: |  |
| Confidence: | 41.522879 |
| Match: | 1zgkA |
| Description: | 1.35 angstrom structure of the Kelch domain of Keap1 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [379-638] |
1 11 21 31 41 51
| | | | | |
1 PEQPGKVQLG RAGFNSLEIS WPIVQGASGY FLQIGFGDAK EQSVSPIKRA TTSPRKQPSI 60
61 VPPSQKETEQ SPKKPQGTAP SIISTQGTTY TAPADPKPAT DEGGLPQDLF EDTEKNETAS 120
121 PKRSNDAQSA DSSTCEQKKT DESGLEEDSE KDQKPSDAGE TDEMKEENGD DDLPWFDVGI 180
181 IDKATINVTH YFNDRQQSLE KQLNDLIDHN AFKCVNDSVF TTEDKIPLIN GQSYRFRVSA 240
241 INGLGKGAWS ETASCKTCVP
|
| Detection Method: | |
| Confidence: | 2.33 |
| Match: | 2ibgA |
| Description: | No description for 2ibgA was found. |
|
Region A: Residues: [639-782] |
1 11 21 31 41 51
| | | | | |
1 GYPSAPSSIR ITKSHEGAQL TWEPPSNTNI SGKIIEYSVY LAVKNQSANS ADSQLAFMRV 60
61 YCGPQADCQV LQSNLGTAFV DQTNKPAIIF RIAARNEKGY GPATQVRWLQ DQQKIPVRTN 120
121 YPNNSGFIYQ QHGGQQKRAR FDHQ
|
| Detection Method: | |
| Confidence: | 16.0 |
| Match: | 1wftA |
| Description: | Solution structure of C-terminal fibronectin type III domain of mouse 1700129L13Rik protein |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| receptor activity | 2.70893613307252 | bayes_pls_golite062009 |
| binding | 2.6879427326284 | bayes_pls_golite062009 |
| transmembrane receptor activity | 2.63145351876028 | bayes_pls_golite062009 |
| protein binding | 2.21770026586875 | bayes_pls_golite062009 |
| cytokine binding | 1.90627686584923 | bayes_pls_golite062009 |
| signal transducer activity | 1.54896140065204 | bayes_pls_golite062009 |
| molecular transducer activity | 1.54896140065204 | bayes_pls_golite062009 |
| cytokine receptor activity | 1.32127809692757 | bayes_pls_golite062009 |
| growth factor binding | 1.07003653734093 | bayes_pls_golite062009 |
| receptor binding | 0.44321055668528 | bayes_pls_golite062009 |
| protein dimerization activity | 0.0111639672367196 | bayes_pls_golite062009 |
