| Protein: | his-54 |
| Organism: | Caenorhabditis elegans |
| Length: | 141 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for his-54.
| Description | E-value | Query Range |
Subject Range |
|
|
210.0 | [0..6] | [141..183] |
|
Region A: Residues: [1-141] |
1 11 21 31 41 51
| | | | | |
1 MANNPFLTLV QRPVQSIEMA PPKPSAKGAK KAAKTVTKPK DGKKRRHARK ESYSVYIYRV 60
61 LKQVHPDTGV SSKAMSIMNS FVNDVFERIA AEASRLAHYN KRSTISSREI QTAVRLILPG 120
121 ELAKHAVSEG TKAVTKYTSS K
|
| Detection Method: |  |
| Confidence: | 45.221849 |
| Match: | 2cv5D |
| Description: | Crystal structure of human nucleosome core particle |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 1.73700145395396 | bayes_pls_golite062009 |
| DNA binding | 1.04127970884713 | bayes_pls_golite062009 |
| nucleic acid binding | 0.86554830065808 | bayes_pls_golite062009 |
| transcription regulator activity | 0.57702121108343 | bayes_pls_golite062009 |
| protein binding | 0.260428734715028 | bayes_pls_golite062009 |
