| Protein: | lin-22 |
| Organism: | Caenorhabditis elegans |
| Length: | 173 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for lin-22.
| Description | E-value | Query Range |
Subject Range |
|
|
128.0 | [0..2] | [171..15] |
|
Region A: Residues: [1-173] |
1 11 21 31 41 51
| | | | | |
1 MTSFLCSDTE IESDGGISRC KKIKNKPLME KKRRARINKS LSQLKQILIQ DEHKNSIQHS 60
61 KWEKADILEM AVEYLQQLRS AQPCSLSPST SSISTPPTPK EEIRNIKVPL NPIASFLNPM 120
121 MQQYVAYQQL AQLSMYTQLF NNPAGVPLRA DAGVTAQSPE LAEKLKIEDR SRV
|
| Detection Method: |  |
| Confidence: | 13.522879 |
| Match: | 1am9A |
| Description: | SREBP-1a |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 2.04189889011459 | bayes_pls_golite062009 |
| DNA binding | 1.34047429825414 | bayes_pls_golite062009 |
| transcription regulator activity | 1.24166705689751 | bayes_pls_golite062009 |
| transcription factor activity | 1.21289741269658 | bayes_pls_golite062009 |
| nucleic acid binding | 1.12120276328559 | bayes_pls_golite062009 |
| protein binding | 0.90375176425983 | bayes_pls_golite062009 |
