| Protein: | avr-14 |
| Organism: | Caenorhabditis elegans |
| Length: | 430 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for avr-14.
| Description | E-value | Query Range |
Subject Range |
|
|
317.0 | [0..12] | [405..86] |
|
Region A: Residues: [1-430] |
1 11 21 31 41 51
| | | | | |
1 MWHYRLTTIL LIISIIHSIR AKRKLKEQEI IQRILKDYDW RVRPRGMNAT WPDTGGPVLV 60
61 TVNIYLRSIS KIDDVNMEYS AQFTFREEWT DQRLAYERYE ESGDTEVPPF VVLATSENAD 120
121 QSQQIWMPDT FFQNEKEARR HLIDKPNVLI RIHKNGQILY SVRLSLVLSC PMSLEFYPLD 180
181 RQNCLIDLAS YAYTTQDIKY EWKEKKPIQQ KDGLRQSLPS FELQDVVTDY CTSLTNTGEY 240
241 SCARVVLRLR REYSYYLIQL YIPCIMLVVV SWVSFWLDKD AVPARVSLGV TTLLTMTTQA 300
301 SGINSKLPPV SYIKAVDVWI GVCLAFIFGA LLEYAVVNYY GRKEFLRKEK KKKTRIDDCV 360
361 CPSDRPPLRL DLSAYRSVKR LPIIKRISEI LSTNIDISRR VDLMSRLTFP LTFFSFLIFY 420
421 YVAYVKQSRD
|
| Detection Method: |  |
| Confidence: | 63.69897 |
| Match: | 2bg9E |
| Description: | Refined structure of the nicotinic acetylcholine receptor at 4A resolution. |
Matching Structure (courtesy of the PDB): |
|
