| Protein: | dbl-1 |
| Organism: | Caenorhabditis elegans |
| Length: | 365 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for dbl-1.
| Description | E-value | Query Range |
Subject Range |
|
|
279.0 | [0..1] | [365..1] |
|
Region A: Residues: [1-114] |
1 11 21 31 41 51
| | | | | |
1 MNDSVRTTTT ISSTKSLVHS FQLSAILHLF LLISFTPMSA AADQHASHAT RRGLLRKLGL 60
61 EHVPVQTGPS IDVPQHMWDI YDDDNDVDWV RHYYPKEIIE DNEGFLLSYN LSLA
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [115-224] |
1 11 21 31 41 51
| | | | | |
1 ARNAHNEEVT KATLKLRLRR NNKARRSGNI SIYFFEDDIN NDRFQIESRS VDNLTEWIDF 60
61 DVTAAFLRRT NRISFFIDLP EDVEIEETQS SSLSSLPYAR AQSAPLIVFS
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [225-365] |
1 11 21 31 41 51
| | | | | |
1 DLSEPSSVRR KRSAQTGNSE RKNRKKGRKH HNTEAESNLC RRTDFYVDFD DLNWQDWIMA 60
61 PKGYDAYQCQ GSCPNPMPAQ LNATNHAIIQ SLLHSLRPDE VPPPCCVPTE TSPLSILYMD 120
121 VDKVIVIREY ADMRVESCGC R
|
| Detection Method: | |
| Confidence: | 40.0 |
| Match: | 1bmpA |
| Description: | BONE MORPHOGENETIC PROTEIN-7 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| receptor binding | 4.70889547404918 | bayes_pls_golite062009 |
| cytokine activity | 3.61376517935324 | bayes_pls_golite062009 |
| growth factor activity | 3.55277889903829 | bayes_pls_golite062009 |
| platelet-derived growth factor binding | 3.43601005070198 | bayes_pls_golite062009 |
| protein binding | 3.16282476674164 | bayes_pls_golite062009 |
| cell surface binding | 2.9725198156666 | bayes_pls_golite062009 |
| binding | 2.37954321554411 | bayes_pls_golite062009 |
| receptor serine/threonine kinase binding | 2.01478614969692 | bayes_pls_golite062009 |
| vascular endothelial growth factor receptor 1 binding | 1.87722086999547 | bayes_pls_golite062009 |
| transmembrane receptor protein serine/threonine kinase binding | 1.87074199164241 | bayes_pls_golite062009 |
| transforming growth factor beta receptor binding | 1.87074199164241 | bayes_pls_golite062009 |
| type II transforming growth factor beta receptor binding | 1.74489645820593 | bayes_pls_golite062009 |
| glycosaminoglycan binding | 1.67879530820663 | bayes_pls_golite062009 |
| collagen binding | 1.64555624988816 | bayes_pls_golite062009 |
| protein dimerization activity | 1.44846386076063 | bayes_pls_golite062009 |
| vascular endothelial growth factor receptor 2 binding | 1.44790236067538 | bayes_pls_golite062009 |
| vascular endothelial growth factor receptor binding | 1.43930353468665 | bayes_pls_golite062009 |
| hormone activity | 1.39628583804208 | bayes_pls_golite062009 |
| heparin binding | 1.30997160523692 | bayes_pls_golite062009 |
| growth factor binding | 1.28535209856904 | bayes_pls_golite062009 |
| glial cell line-derived neurotrophic factor receptor binding | 1.16821412683065 | bayes_pls_golite062009 |
| polysaccharide binding | 1.16191864095271 | bayes_pls_golite062009 |
| protein homodimerization activity | 1.13743310822539 | bayes_pls_golite062009 |
| platelet-derived growth factor receptor binding | 1.12951786832285 | bayes_pls_golite062009 |
| identical protein binding | 1.0030262164995 | bayes_pls_golite062009 |
| pattern binding | 0.90497366619649 | bayes_pls_golite062009 |
| neurotrophin receptor binding | 0.81172494974121 | bayes_pls_golite062009 |
| protein heterodimerization activity | 0.408562885230686 | bayes_pls_golite062009 |
| transcription activator activity | 0.140318739604937 | bayes_pls_golite062009 |
| fibronectin binding | 0.1110090445978 | bayes_pls_golite062009 |
| catalytic activity | 0.105223830172599 | bayes_pls_golite062009 |
| carbohydrate binding | 0.0235054088545197 | bayes_pls_golite062009 |
