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View Structure Prediction Details

Protein: unc-8
Organism: Caenorhabditis elegans
Length: 777 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for unc-8.

Description E-value Query
Range
Subject
Range
gi|39593543, gi|... - gi|39593543|emb|CAE61835.1| Hypothetical protein CBG05805 [Caenorhabditis briggsae], gi|187034702|em...
gi|157756309 - gi|157756309|ref|XP_001670498.1| Hypothetical protein CBG05805 [Caenorhabditis briggsae AF16]
599.0 [0..33] [777..1]

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Predicted Domain #1
Region A:
Residues: [1-89]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSPLLTWNLI CVSSRWYTIL CLKNKVKFWL GTRLVHEPES MESRSSPYIR PSPYAGGVHP  60
   61 HFEEEDDRSK LHASALYSER RTSSRKSLR

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [90-290]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SQKIDYHTTT IKSLWFDFCA RTSSHGIPYV ATSSFFGRYV WAALFMCMLM AFLLQTYWTM  60
   61 SEYLQYRTII EMQLQFEAAA FPAATVCNLN AFKYSELTQY EEIKEGFDYW ERVINARMMS 120
  121 DSMKPGGDIL EAISVRKKRS KSRDQLLFPI DDEDLEGAVY QPVFVRCTCM NMEQCVPNRN 180
  181 PLEVNASICM CFEDVTRGLI W

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 4.03
Match: 2qtsA
Description: No description for 2qtsA was found.

Predicted Domain #3
Region A:
Residues: [291-777]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PCYPTSVWTV KKCSGCSISN TCPDPDGPNA SKQIAKHNSP LPCLCQSISH HCMVHPKDEI  60
   61 RWWNPNNYTV YSVTEPPTTE ITETEEAFGL SDLKDAGAIT TQTKENLIFL VAALPRETRR 120
  121 NLSYTLNEFV LRCSFNSKDC SMERDFKLHV DPEYGNCYTF NFNDSVELKN SRAGPMYGLR 180
  181 LLLNVHQSDY MPTTEAAGVR LVVHEQDQEP FPDTFGYSAP TGFISSFGLK TKELHRLSAP 240
  241 WGNCSDTFRP VPYIYNEHYS PEGCHRNCFQ LKVLEICGCG DPRFPLPSEE HRHCNAKSKI 300
  301 DRQCLSNLTS DSGGYHHLHE QCECRQPCHE KVFETAYSAS AWPSQNFKIG TDCPAVSDIF 360
  361 NDTEACTEYY RQNTAYIEIY YEQLNFESLK ETAGYTLVNL FSDFGGNIGL WIGFSVITFA 420
  421 EFAELFCEIC KLMYFKGIVY VQKKMQGKEY TSSSLMHIDF LQRSPKKSQP GEDEVSTNES 480
  481 TKELMSK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 87.0
Match: 2qtsA
Description: No description for 2qtsA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle