| Protein: | CE26110 |
| Organism: | Caenorhabditis elegans |
| Length: | 315 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE26110.
| Description | E-value | Query Range |
Subject Range |
|
|
198.0 | [0..6] | [260..364] |
|
Region A: Residues: [1-315] |
1 11 21 31 41 51
| | | | | |
1 MLIERSFSGP RKYQNADEAS LVPSPKLYTF EQAFNNPNLI FNRTKLTPTG KRFATSIDVM 60
61 QNFRRVFILF KDVLSVIPEF SKLCESDKMT LGKSRFSVFY WWLLCCWIAK CGSSGVCYSN 120
121 GSYFPLDTNF QPIPDLKGIT ELAIEAVSKP LARLCLTEEE ILIGSVRKMR GIVFFFKQKI 180
181 NLFTKKFKNQ KKIPSNMCLT RNHSSDPLPP KMPHASTQIL SNARDRYIQC MINVSSCSEV 240
241 QSALRLAEIS LIFPSITVGK LNGIKNSKSF QNFMTPKILN FQNLVHLTSD NIKVLDAMRV 300
301 LEADQLFRDV FIVKP
|
| Detection Method: |  |
| Confidence: | 47.522879 |
| Match: | 1dkfA |
| Description: | Retinoid-X receptor alpha (RXR-alpha) |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 1.15996699473685 | bayes_pls_golite062009 |
| transcription regulator activity | 0.46162010671465 | bayes_pls_golite062009 |
| protein binding | 0.33427459029264 | bayes_pls_golite062009 |
| nucleic acid binding | 0.15459949087509 | bayes_pls_golite062009 |
| DNA binding | 0.14395376162921 | bayes_pls_golite062009 |
