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View Structure Prediction Details

Protein: gcy-28
Organism: Caenorhabditis elegans
Length: 637 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gcy-28.

Description E-value Query
Range
Subject
Range
gcy-28 - status:Confirmed UniProt:Q86GV3 protein_id:AAO61423.1
489.0 [0..1] [636..628]

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Predicted Domain #1
Region A:
Residues: [1-398]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIDRKLSIFT RKKSTPPSES QKNGGLTPNS LQKAENGDCS PINEVQFRLP LNDRRVSSPS  60
   61 SEATRKKNSN EEDPENGAKK SLSLKNRKLS FGMVSFKSGS GGSVETIAQN NTQIYTKTAI 120
  121 FKGVVVAIKK LNIDPKKYPR LDLSRAQLME LKKMKDLQHD HITRFTGACI DFPHYCVVTE 180
  181 YCPKGSLEDI LENEKIELDK LMKYSLLHDL VKGLFFLHNS EIRSHGRLKS SNCVVDSRFV 240
  241 LKVTDFGLHR LHCLEEINLE EIGEHAYYKK MLWTAPELLR DSNAPPMGTQ KGDIYSFAII 300
  301 LHEMMFRKGV FALENEDLSP NEIVQRVRKP VSEDQEPLRP WVSETGEGEG DDALNDTLLS 360
  361 LMVACWSEDP HERPEVSSVR KAVRSLNRDN ETSNLVDN

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 48.522879
Match: 2qkwB
Description: No description for 2qkwB was found.

Predicted Domain #2
Region A:
Residues: [399-506]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LLKRMEQYAN NLEGLVEERT QEYLAEKKKV EELLHQLLPP AIADTLIAGR AVQAESYDCV  60
   61 TIYFSDIVGF TSLSSQSTPM QVVTLLNDLY LAFDGVVDNF KVYKVETI

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 3.03
Match: 1wc1A
Description: Soluble adenylyl cyclase CyaC from S. platensis in complex with Rp- ATPalphaS
Matching Structure (courtesy of the PDB):

Predicted Domain #3
Region A:
Residues: [507-637]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GDAYMVVSGL PERRDDHANQ IAQMSLSLLH KVKNFVIRHR PHEQLKLRIG MHSGSVVAGV  60
   61 VGSKMPRYCL FGDTVNTSSR MESNGLRMFW NFSLYKIYKF KVFKNKIELD FLKNEKESIE 120
  121 FEGKKMVTEF N

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 50.30103
Match: 1yk9A
Description: Crystal structure of a mutant form of the mycobacterial adenylyl cyclase Rv1625c
Matching Structure (courtesy of the PDB):

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Created and Maintained by: Michael Riffle