| Protein: | cas-1 |
| Organism: | Caenorhabditis elegans |
| Length: | 495 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for cas-1.
| Description | E-value | Query Range |
Subject Range |
|
|
675.0 | [0..1] | [494..1] |
|
Region A: Residues: [1-216] |
1 11 21 31 41 51
| | | | | |
1 MSTQEDFLKR LESVTSRLEA IAGQKPALAP KPTNLGGPSA SAAASAGDSG EVPAHVRAYD 60
61 DAIEEPLANW SKLTDQLGGD LAAVKPKVLA MFASMRNYLW SAAGKSEPSA EEAQKMLTPV 120
121 INLLGEINNF KDTKRKTPHW NHLNSVAEAL PALGWVTVKK TPAPYVKEFI EAAQFYINPI 180
181 LREFKETDPR HVEWTKAWKA VFEEMQKFVR QVHTTG
|
| Detection Method: |  |
| Confidence: | 62.522879 |
| Match: | 1tjfA |
| Description: | The crystal structure of the N-terminal domain of CAP indicates variable oligomerisation |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| actin binding | 1.59850944021401 | bayes_pls_golite062009 |
| cytoskeletal protein binding | 1.08859857656487 | bayes_pls_golite062009 |
| binding | 0.923764328759134 | bayes_pls_golite062009 |
| enzyme binding | 0.47575292047999 | bayes_pls_golite062009 |
| protein binding | 0.153255883232138 | bayes_pls_golite062009 |
|
Region A: Residues: [217-338] |
1 11 21 31 41 51
| | | | | |
1 LVWNSAPGAA PDASASAPSA AAPSAPKAPA GPGGPPPPPP PPPADFFANI APPPVDADKA 60
61 SRDALFASLN QGEGVTSRLK KVTADMQTHK NPNLRGTAVV PAAGASQGGS SPAKPAAPVR 120
121 KP
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [339-495] |
1 11 21 31 41 51
| | | | | |
1 PHKELENGKQ WIVEYFVNDP NIVLDVADKK QTVYIYRCEN SVIKVNGKAN SITLDGCKKT 60
61 SVVFDALVAQ CETVNCQSVQ IQTLGELPTL SIQKTDGCQV YLSKVAQGCE IVTSKSSEMN 120
121 ISVQTNDDGD YSEFPVPEQF KTTFVNGKLV TVVSDIC
|
| Detection Method: | |
| Confidence: | 74.221849 |
| Match: | 1k8fA |
| Description: | C-terminal domain of adenylylcyclase associated protein |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| cytoskeletal protein binding | 0.90871846524713 | bayes_pls_golite062009 |
| actin binding | 0.72899481885448 | bayes_pls_golite062009 |
| binding | 0.665494982655313 | bayes_pls_golite062009 |
