| Protein: | mex-3 |
| Organism: | Caenorhabditis elegans |
| Length: | 415 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for mex-3.
| Description | E-value | Query Range |
Subject Range |
|
|
308.0 | [0..1] | [415..1] |
|
Region A: Residues: [1-123] |
1 11 21 31 41 51
| | | | | |
1 MKEEQIAYKL PGAWYYEEDT ASCSPVSDPE DIAQFLNYRT SIGVQNVTES VEVPTSEHVA 60
61 EIVGRQGCKI KALRAKTNTY IKTPVRGEDP IFVVTGRLED VNEAKREIDC AAEHFTQIRA 120
121 SRR
|
| Detection Method: |  |
| Confidence: | 9.221849 |
| Match: | 1x4nA |
| Description: | Solution structure of KH domain in FUSE binding protein 1 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| nucleic acid binding | 2.76562424828414 | bayes_pls_golite062009 |
| binding | 2.12000404411947 | bayes_pls_golite062009 |
| mRNA binding | 1.67623463602459 | bayes_pls_golite062009 |
| RNA binding | 1.5640739272938 | bayes_pls_golite062009 |
| transcription regulator activity | 0.573444640703857 | bayes_pls_golite062009 |
| catalytic activity | 0.483552478758071 | bayes_pls_golite062009 |
| protein binding | 0.446932489882167 | bayes_pls_golite062009 |
| DNA binding | 0.219740042471452 | bayes_pls_golite062009 |
| transcription repressor activity | 0.0918327634805927 | bayes_pls_golite062009 |
|
Region A: Residues: [124-206] |
1 11 21 31 41 51
| | | | | |
1 HTQVVPGAHA PGQITSYVRV PLRVVGLVVG PKGATIKRIQ QDTHTYIITP SREREPVFEV 60
61 TGLPHNVEAA RKEIETHIFQ RTG
|
| Detection Method: | |
| Confidence: | 12.69897 |
| Match: | 2dgrA |
| Description: | No description for 2dgrA was found. |
|
Region A: Residues: [207-415] |
1 11 21 31 41 51
| | | | | |
1 NLPETDNDFA GQLAGVSLMV QKQQQAQQQM QEAQQQSMFY RRAFGNSNPF NQKEMSSSPF 60
61 GMESSLGLDA LLRSFPSMRS SLTPESLSGT GLSSRPSLGG GQSAKQDLPT YDYWGTNNSL 120
121 NDIMENEILS RKYDALSAWS SMGLEKREES PTNGLMSSLK GTSAGFGLLS TIWSGGNMNL 180
181 SPGSLASASA SPTSSTCDHN DHTLVPING
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
