| Protein: | unc-18 |
| Organism: | Caenorhabditis elegans |
| Length: | 591 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for unc-18.
| Description | E-value | Query Range |
Subject Range |
|
|
585.0 | [0..1] | [591..1] |
|
Region A: Residues: [1-591] |
1 11 21 31 41 51
| | | | | |
1 MSLKQIVGHK LLNDVIRPLK KGDGRSAWNV LIVDTLAMRM LSSCCKMHNI MEEGITIVED 60
61 LNKRREPLPT LEAIYLIAPT AESIDKLIQD YCARNLYKCA HVFFTEACSD QLFSTLSKSA 120
121 AARFIKTLKE INIAFTPYES QVFNLDSPDT FFLYYNAQKQ GGLTSNLERI AEQIATVCAT 180
181 LGEYPSLRYR ADFERNVELG HLVEQKLDAY KADDPSMGEG ADKARSQLII IDRGYDAITP 240
241 LLHELTLQAM CYDLLGIEND VYKYETGGSD ENLEKEVLLD ENDDLWVEMR HKHIAVVSQE 300
301 VTKNLKKFSE SKGNKGTMDS KSIKDLSMLI KRMPQHKKEL NKFSTHISLA EECMKQYQQG 360
361 VDKLCKVEQD LSTGIDAEGE RVRDAMKLMV PLLIDPAVRC EDRLRLILLY ILSKNGITDE 420
421 NLNKLLQHAN ISMADKETIT NAAYLGLNIV TDTGRKKTWT PTKKERPHEQ VYQSSRWVPV 480
481 IKDIIEDAID ERLDTKHFPF LAGRQVNQGY RAPASARYGQ WHKERGQQSN YRSGPRLIIY 540
541 IIGGVTFSEM RACYEVTAAR KPWEVVIGSD RIITPDKFLT NLRDLNKPRD I
|
| Detection Method: |  |
| Confidence: | 160.0 |
| Match: | 1epuA |
| Description: | Neuronal Sec1, NSec1 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| SNARE binding | 4.56428593085019 | bayes_pls_golite062009 |
| syntaxin binding | 3.46044132736061 | bayes_pls_golite062009 |
| binding | 2.7837022903231 | bayes_pls_golite062009 |
| protein binding | 2.77285532000616 | bayes_pls_golite062009 |
| syntaxin-1 binding | 0.269372794919901 | bayes_pls_golite062009 |
