| Protein: | nhr-117 |
| Organism: | Caenorhabditis elegans |
| Length: | 435 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for nhr-117.
| Description | E-value | Query Range |
Subject Range |
|
|
289.0 | [0..2] | [434..18] |
|
Region A: Residues: [1-88] |
1 11 21 31 41 51
| | | | | |
1 MQNSIDFCSA SSSTSSNYSS PPAVLDIDQV LEKCQICYQP GHGYHFGAFI CRACAAFFRR 60
61 CHFSLALDQR KCRLLSGSCQ PNKNGRWF
|
| Detection Method: |  |
| Confidence: | 20.0 |
| Match: | 2hanB |
| Description: | No description for 2hanB was found. |
| Term | Confidence | Notes |
| binding | 1.18770607371139 | bayes_pls_golite062009 |
| protein binding | 0.699012253331291 | bayes_pls_golite062009 |
|
Region A: Residues: [89-435] |
1 11 21 31 41 51
| | | | | |
1 CKKCRFDKCL ELGMTTTNIQ YDRDAFKSSA SFLKNKSVAK RVADRVSVPM TVESALGINP 60
61 IMIFTYADEN KQFPFIDISQ LVDKALSSIL TPISVRKIKK MSNLEQLTQG LDEFQWTQKE 120
121 SVSQIVRLSA NDHLNDFQTY MCAAAKWLSY SDRIRNLDDE LKIQILQCIW FNWGRLERIA 180
181 TTAKMRNKRK CGKKQFVFSN NILLDYDEMS SDLSFWSNYT FEEMKYFFIP TEMFYDEVIC 240
241 EMEEVQPDNM ETTFIISLMC FHLTGKQFGG QVQEEMDQLQ DLLSDELHEY YLKKNMTMYS 300
301 LRLKQLMKIK EKFLKLRYKR CEKYKIAGIF EAFHTNLSNP EFFMIPA
|
| Detection Method: | |
| Confidence: | 32.39794 |
| Match: | 1z5xE |
| Description: | hemipteran ecdysone receptor ligand-binding domain complexed with ponasterone A |
Matching Structure (courtesy of the PDB): |
|
