| Protein: | ggtb-1 |
| Organism: | Caenorhabditis elegans |
| Length: | 335 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ggtb-1.
| Description | E-value | Query Range |
Subject Range |
|
|
369.0 | [0..7] | [332..1] |
|
Region A: Residues: [1-335] |
1 11 21 31 41 51
| | | | | |
1 MSFAGLLDFA RKDVDLPQNS PNELLKDLHA NFINQYEKNK NSYHYIMAEH LRVSGIYWCV 60
61 NAMDLSKQLE RMSTEEIVNY VLGCRNTDGG YGPAPGHDSH LLHTLCAVQT LIIFNSIEKA 120
121 DADTISEYVK GLQQEDGSFC GDLSGEVDTR FTLCSLATCH LLGRLSTLNI DSAVRFLMRC 180
181 YNTDGGFGTR PGSESHSGQI YCCVGALAIA GRLDEIDRDR TAEWLAFRQC DSGGLNGRPE 240
241 KLPDVCYSWW VLASLAILGR LNFIDSDAMK KFIYACQDDE TGGFADRPGD CADPFHTVFG 300
301 IAALSLFGDD TLESVDPIFC MTKRCLGDKQ VEMYY
|
| Detection Method: |  |
| Confidence: | 101.0 |
| Match: | 1dceB |
| Description: | Rab geranylgeranyltransferase, beta subunit |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| protein prenyltransferase activity | 13.7736019666673 | bayes_pls_golite062009 |
| protein geranylgeranyltransferase activity | 12.9757276506747 | bayes_pls_golite062009 |
| Rab geranylgeranyltransferase activity | 12.8088011327065 | bayes_pls_golite062009 |
| prenyltransferase activity | 11.6786310564018 | bayes_pls_golite062009 |
| CAAX-protein geranylgeranyltransferase activity | 10.5569796788906 | bayes_pls_golite062009 |
| protein farnesyltransferase activity | 4.15546866363415 | bayes_pls_golite062009 |
| binding | 1.68564752993879 | bayes_pls_golite062009 |
| protein binding | 1.45455287827127 | bayes_pls_golite062009 |
| transferase activity | 1.0950430724883 | bayes_pls_golite062009 |
| catalytic activity | 0.497699107100544 | bayes_pls_golite062009 |
