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View Structure Prediction Details

Protein: CE24754
Organism: Caenorhabditis elegans
Length: 392 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE24754.

Description E-value Query
Range
Subject
Range
CE05309 - WBGene00007735 status:Partially_confirmed TR:Q18173 protein_id:CAA94574.1
564.0 [0..2] [386..13]

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Predicted Domain #1
Region A:
Residues: [1-179]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSKTENSQES SDTITFVHSC QVPITEVNHM MPIHFATVHE YSLINWSLQI SEAGGIPRFL  60
   61 RNLEPEPRET VFQVTLHPVG QRDSYPPVLK VDFKLKLVGS SDQDILAPVR FTHPPGFPNR 120
  121 NGFNSGYSTP ASGAVRDFLV GVIGNRRYEN CMFEILTVIV FDIKEFLSMT HLNRIFGKP

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [180-392]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPVDLNFRFN LLMNQKTHNF LLTTTTQLEF PCNKEGLYVA SPYFRKNLTS TMTSFPLDVQ  60
   61 YLEAIEVVIS WMFTESYHPP TKLTPKLAEE IVKLSERIVP PGPNRKQLAG SIERHCFEEL 120
  121 ILNCEDMAYV KELMLMAHTN RLDSLHEACN ATIISFHFAD FCRDMKQNPD PAFTQHQMHR 180
  181 SSVMSRLYDN YGKSLCVHSF MRKIPPVVMA QQG

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.14
Match: 1buoA
Description: Promyelocytic leukaemia zinc finger (PLZF) protein BTB domain
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle