| Protein: | mig-1 |
| Organism: | Caenorhabditis elegans |
| Length: | 525 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for mig-1.
| Description | E-value | Query Range |
Subject Range |
|
|
307.0 | [0..21] | [494..485] |
|
Region A: Residues: [1-152] |
1 11 21 31 41 51
| | | | | |
1 MGPFRGYLGV TWLLLLFVIG VDGQRCQKVD HEMCNDLPYN LTSFPNLVDE ESWKDASESI 60
61 LTYKPLLSVV CSEQLKFFLC SVYFPMCNEK LANPIGPCRP LCLSVQEKCL PVLESFGFKW 120
121 PDVIRCDKFP LENNREKMCM KGPNEQGAIQ DE
|
| Detection Method: |  |
| Confidence: | 38.045757 |
| Match: | 1ijyA |
| Description: | Frizzled 8 (FZ8) |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.842553069457781 | bayes_pls_golite062009 |
| protein binding | 0.38272509672861 | bayes_pls_golite062009 |
| signal transducer activity | 0.10914920024051 | bayes_pls_golite062009 |
| molecular transducer activity | 0.10914920024051 | bayes_pls_golite062009 |
|
Region A: Residues: [153-525] |
1 11 21 31 41 51
| | | | | |
1 RAKFAAKESE DDGNDRVEDI QREVDRLNGK CPQDEVFLNR SSKCVPLCSN PQKVGQTDRE 60
61 SATRLLLFLS LSSVILTILS VFIVGLSRLE MLHSLTETAM FFSCISFCAT SVIYIVSISF 120
121 KDQFQISCTD YTHHLLFVVG GLSHVPCSSV ASLIYYTATC SRLWWLLICV SWNKATRTSH 180
181 ILDDSRTRVI MLILGIPLAP LMLALLAKAV AANPLTGLCF IGAASPGTDW IFNFCRELIL 240
241 FLISSIALSS ACCRLLGSDE QDVNGFAGVI AAVYPIAGLF YMLSFVNDAT QPFLSLDRSF 300
301 NAVSATKFSF DLLLSFIMCA FCLIYLLFKL TRSSSKVSKE GYQPAVPKLP QPAIPGSVRS 360
361 NTYASTFRTN NMI
|
| Detection Method: | |
| Confidence: | 2.17 |
| Match: | 1f88A |
| Description: | Rhodopsin |
Matching Structure (courtesy of the PDB): |
|
