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View Structure Prediction Details

Protein: CE23985
Organism: Caenorhabditis elegans
Length: 405 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE23985.

Description E-value Query
Range
Subject
Range
gi|89200187, gi|... - gi|89200187|ref|ZP_01178942.1| Cysteine desulphurases, SufS [Bacillus cereus subsp. cytotoxis NVH 39...
302.0 [0..24] [398..6]

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Predicted Domain #1
Region A:
Residues: [1-405]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MISTRFLRPS VSIFGFGIKS SMSSRAPPKA LLQDMVVPPR QLFGPGPSNM ADSIAETQSR  60
   61 NLLGHLHPEF VQIMADVRLG LQYVFKTDNK YTFAVSGTGH SGMECAMVNL LEPGDKFLVV 120
  121 EIGLWGQRAA DLANRMGIEV KKITAPQGQA VPVEDIRKAI ADYKPNLVFV CQGDSSTGVA 180
  181 QPLETIGDAC REHGALFLVD TVASLGGTPF AADDLKVDCV YSATQKVLNA PPGLAPISFS 240
  241 DRAMEKIRNR KQRVASFYFD AIELGNYWGC DGELKRYHHT APISTVYALR AALSAIAKEG 300
  301 IDESIQRHKD NAQVLYATLK KHGLEPFVVD EKLRLPCLTT VKVPEGVDWK DVAGKMMTNG 360
  361 TEIAGGLGAT VGKIWRIGTF GINSNSTKIE NVVELLSKSI GEKSK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 76.0
Match: 1j04A
Description: Structural mechanism of enzyme mistargeting in hereditary kidney stone disease in vitro
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
alanine-glyoxylate transaminase activity 5.09067995370888 bayes_pls_golite062009
serine-pyruvate transaminase activity 3.41330924856745 bayes_pls_golite062009
glycine dehydrogenase (decarboxylating) activity 3.04830539911875 bayes_pls_golite062009
oxidoreductase activity, acting on the CH-NH2 group of donors, disulfide as acceptor 3.04830539911875 bayes_pls_golite062009
L-aspartate:2-oxoglutarate aminotransferase activity 2.30133284041702 bayes_pls_golite062009
catalytic activity 2.29878871754893 bayes_pls_golite062009
O-phospho-L-serine:2-oxoglutarate aminotransferase activity 2.1692959843619 bayes_pls_golite062009
transferase activity 1.87576812699884 bayes_pls_golite062009
transferase activity, transferring nitrogenous groups 1.28316822767388 bayes_pls_golite062009
transaminase activity 1.24990480711889 bayes_pls_golite062009
transferase activity, transferring acyl groups 1.19150094103499 bayes_pls_golite062009
4-aminobutyrate transaminase activity 1.1251558546682 bayes_pls_golite062009
binding 0.513318446274735 bayes_pls_golite062009
L-allo-threonine aldolase activity 0.500744432308415 bayes_pls_golite062009
glycine hydroxymethyltransferase activity 0.271623203801431 bayes_pls_golite062009
methyltransferase activity 0.093175965161657 bayes_pls_golite062009
transferase activity, transferring one-carbon groups 0.0150995688991599 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle