| Protein: | CE23557 |
| Organism: | Caenorhabditis elegans |
| Length: | 454 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE23557.
| Description | E-value | Query Range |
Subject Range |
|
|
252.0 | [0..89] | [433..1] |
|
Region A: Residues: [1-86] |
1 11 21 31 41 51
| | | | | |
1 MTSIIRAEYA ACQELKKLEN SSYNPGGCSV DFDKSLCWAS AHIGQQMTRD CPFTFCTAIP 60
61 GCEEIKDRYM VSRNCNSMGV WQDSNY
|
| Detection Method: |  |
| Confidence: | 19.0 |
| Match: | 2jodA |
| Description: | No description for 2jodA was found. |
| Term | Confidence | Notes |
| G-protein coupled receptor activity | 7.11838006478957 | bayes_pls_golite062009 |
| transmembrane receptor activity | 5.41031049482732 | bayes_pls_golite062009 |
| receptor activity | 5.12318570081263 | bayes_pls_golite062009 |
| signal transducer activity | 4.16951678107564 | bayes_pls_golite062009 |
| molecular transducer activity | 4.16951678107564 | bayes_pls_golite062009 |
| pituitary adenylate cyclase-activating polypeptide receptor activity | 2.36627671354861 | bayes_pls_golite062009 |
| binding | 1.90935265027969 | bayes_pls_golite062009 |
| peptide binding | 1.37672683415634 | bayes_pls_golite062009 |
| secretin receptor activity | 1.22301183149097 | bayes_pls_golite062009 |
| growth hormone-releasing hormone receptor activity | 0.621179725102141 | bayes_pls_golite062009 |
|
Region A: Residues: [87-454] |
1 11 21 31 41 51
| | | | | |
1 TMCIKVVEEY AQCLQGFCRV CPDVLRDLVI SVSLTLSFVS VILLVAAIVL FSIFDSIQCR 60
61 RLSIHKNLAT AFVFRFAVLA IWTIVQTTNV FQDCTRLTPL PLWDYEWICK AILWFVIYFN 120
121 VASVMWMLIE GAFLYSRFTV FAMRHSDAPW SLYLACGWGV PFVVVTAWAL VHQYISSQQT 180
181 NSFCWLPYAQ GLHLWILAGT MGSALIMNLI FLLMIVVILV QKLRTENSAE SKKIWRTIKA 240
241 TLLLVPLLGI SNIPLFYEPE HPSSVYMLGS AILQHSQGIF IAVLYCFLNS EIQGALKRQL 300
301 SKVPFEFFKT RNRFETERTY VPEARNATKN GVPMEEMNKT KNIESGENTE SQDQVSTGKQ 360
361 IYSVSTKS
|
| Detection Method: | |
| Confidence: | 45.522879 |
| Match: | 1f88A |
| Description: | Rhodopsin |
Matching Structure (courtesy of the PDB): |
|
