| Protein: | lag-2 |
| Organism: | Caenorhabditis elegans |
| Length: | 402 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for lag-2.
| Description | E-value | Query Range |
Subject Range |
|
|
276.0 | [0..3] | [353..1521] |
|
Region A: Residues: [1-402] |
1 11 21 31 41 51
| | | | | |
1 MIAYFLLLLT CLPVLQARVE VHQEFISSKR VSVRFEIVTE SHSPNRPVTF DLFPRGPKTN 60
61 IILLDTFNPV FNFSIQLVQP FTGQPLGDRI YRKVQFSGTN QPWINDTFTT TSGISLSVAT 120
121 EVTCARNYFG NRCENFCDAH LAKAARKRCD AMGRLRCDIG WMGPHCGQAV DPRKCSCEND 180
181 GICVSSMIHP SQPNQTSSNE QLICECTNGF TGTRCEIFGF NQFQLTAPRP DACSVKDACL 240
241 NGAKCFPNGP KVFCSCAVGF IGEFCEISLT TTTPTTVEIT VSTSGYSSAV YITVALFVIF 300
301 SIIIGCFKYK FKPMRQQALA RGQVPEPYKM PETKSMLIDP EASEAQKKVF TIEGSVQKID 360
361 EEVRYTSAPR KYESNNEYAV IQKSTPPPPS LSPPSIPACH YV
|
| Detection Method: |  |
| Confidence: | 12.30103 |
| Match: | 1n7dA |
| Description: | Low density lipoprotein (LDL) receptor YWTD domain; Low density lipoprotein (LDL) receptor, different EGF domains; Ligand-binding domain of low-density lipoprotein receptor |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 1.44119144078508 | bayes_pls_golite062009 |
| receptor binding | 1.40618339011373 | bayes_pls_golite062009 |
| protein binding | 1.15716342217655 | bayes_pls_golite062009 |
| ErbB-2 class receptor binding | 1.04038130958316 | bayes_pls_golite062009 |
| growth factor activity | 0.25853515067422 | bayes_pls_golite062009 |
