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View Structure Prediction Details

Protein: CE22611
Organism: Caenorhabditis elegans
Length: 732 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE22611.

Description E-value Query
Range
Subject
Range
CE34238 - status:Partially_confirmed UniProt:Q2MGE6 protein_id:ABC71845.1
542.0 [0..2] [730..4]

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Predicted Domain #1
Region A:
Residues: [1-125]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDTPLGRLIN FLVEWTKNVV EPLVGGRIFN RFAELDGAGL SHIYYYIRFH EHIAPNIAKW  60
   61 DNFNVTTRIR MMFALSGEVP DDFLALIKLT GTVQLDAKRR ISKYASNDGN LKLEGCHGCT 120
  121 ARSKN

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 61.657577
Match: PF04435.9
Description: No description for PF04435.9 was found.

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [126-248]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ERGKDPAEIT RFMNFLVEKA KVSTDPMFAS VVFTEFRKSE EDGLAYSTYC RKFYNYLAPR  60
   61 MDQFVNYSIE ERVRLMFGLG GEVTEDFLKL CRKEGVVELD KNNRICEYIS YDGTLKLGAA 120
  121 HGL

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 65.221849
Match: PF04435.9
Description: No description for PF04435.9 was found.

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [249-392]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SANMKRRSLL IAKDPSDLPR LMNFLVEKTK DATEPMVSIA ELSEFRRRER SELTEQAYYG  60
   61 KFHRQLAPKM GQIVNYSIEE RVRVMFGFAG EVTDDFLKQI QTIGTVHLDE KKRICKYATH 120
  121 DGKLKLEGDH SHTARMLRRG AYYR

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 68.173925
Match: PF04435.9
Description: No description for PF04435.9 was found.

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [393-656]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RLKTGRKSIS KFSGMEHSRS PKRARISERD DDDEYFGVVN EGESHNRDVS HHNLNIDYLQ  60
   61 ANNQPIPEDL PYEIDDDEME HVGAVNYDPE HRHFDFDDSH IGHLQNDEEM MNNQSIPEDP 120
  121 SYKSDEVEYN GSLPGLPKPE PIDFDFYQIY NRDVSHSLNL NNLRENKEVS WNPSISEIKV 180
  181 DFTFFERQQF SVPTNNGATS AESKIISLHD FLKSLIQFIC FLESSELTEI KQKIKESIRT 240
  241 DNDKFLQITD ICTVLQAFFF GISR

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #5
Region A:
Residues: [657-732]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KFRLAAAASN SPAMKMKDFL VKFKLFLLGL DSSELLELQQ KVQENIDEQT ELAEKVLPIS  60
   61 DVRQSLQNLL STISQY

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


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