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View Structure Prediction Details

Protein: CE22127
Organism: Caenorhabditis elegans
Length: 620 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE22127.

Description E-value Query
Range
Subject
Range
gi|46850200 - gi|46850200|gb|AAT02533.1| NADP-dependent malic enzyme 1 [Hydrilla verticillata]
796.0 [0..15] [591..80]

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Predicted Domain #1
Region A:
Residues: [1-620]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLSRLSPASI RRLSTSTRCL SDKNEPDLSD PKTLALHKLY RPERTTPQKR GIDLLKSPGL  60
   61 NKGMAFSLHE RQYLGVHGLL PPAFMTEEQQ AYRIITKLRQ QPDNLAKYIQ LDSLQDRNEK 120
  121 LYYRVLCDNV KELMPIVYTP TVGQACQHFG FIYRNPKGLY ITINDNSISK IHQILANWPT 180
  181 ENVRAIVITD GERILGLGDL GTYGIGIPVG KLALYVALAG IRPEWCLPVI LDVGTDNSEL 240
  241 LNDPFYTGLR RKRVRGPEYD TLVDNFMKAA TKRFGRDTLI QFEDFGNQNA YRLLDRYKGE 300
  301 YCMFNDDIQG TAAVVVAGLL ASTRITKKKL SQERIVFLGA GGAATGVAEM CVRQMMDEGL 360
  361 SEEEACGRIY MVDIEGLITT SRSKSLGERH VKFAKDLPDT KNLLEVVKTV KPGALIGAST 420
  421 VAGAFTEDII KEMARLNPRP IIFALSNPTS KAECTAETAY RCTNGAVLFA SGSPFENVEM 480
  481 NGKLYKPGQG NNAYIFPGVA LGAVLFRTKN IPDKLFLLAA RMVAEAVSEK SLNTYSRVYP 540
  541 RLKDIRELSV KIAVEVGEYC YRHDLATLHP KPDDMEMFIR QNLYSVEYDE LINKTYEWPA 600
  601 KDSKHGFPVP VLRRTSMDEE 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 1000.0
Match: 1llqA
Description: Mitochondrial NAD(P)-dependenent malic enzyme
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle