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View Structure Prediction Details

Protein: acs-1
Organism: Caenorhabditis elegans
Length: 623 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for acs-1.

Description E-value Query
Range
Subject
Range
gi|75514828, gi|... - gi|75514828|ref|ZP_00737057.1| COG0365: Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases [Escher...
gi|157163539, gi... - gi|75197927|ref|ZP_00707997.1| COG0365: Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases [Escher...
555.0 [0..14] [623..13]

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Predicted Domain #1
Region A:
Residues: [1-623]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSQVAAMDLR VLTQFDIASL EEDRKKMLYE EPISLEEAAL NANDVMVAPS RKSYVHGCST  60
   61 VPLLFETVGD RLRSAVDQVP DKEFLIFKRE GIRKTYSQVA TDAENLACGL LHLGLKKGDR 120
  121 IGIWGPNTYE WTTTQFASAL AGMVLVNINP SYQSEELRYA IEKVGIRALI TPPGFKKSNY 180
  181 YQSIKDILPE VTLKEPGKSG ITSRNFTCFQ HLIMFDEEDK IYPGAWKYTD VMKMGTEEDR 240
  241 HHLSKIERET QPDDSLNIQY TSGTTGQPKG ATLTHHNVLN NAFFVGLRAG YSEKKTIICI 300
  301 PNPLYHCFGC VMGVLAALTH LQTCVFPAPS FDALAALQAI HEEKCTALYG TPTMFIDMIN 360
  361 HPEYANYNYD SIRSGFIAGA PCPITLCRRL VQDMHMTDMQ VCYGTTETSP VSFMSTRDDP 420
  421 PEQRIKSVGH IMDHLEAAIV DKRNCIVPRG VKGEVIVRGY SVMRCYWNSE EQTKKEITQD 480
  481 RWYHTGDIAV MHDNGTISIV GRSKDMIVRG GENIYPTEVE QFLFKHQSVE DVHIVGVPDE 540
  541 RFGEVVCAWV RLHESAEGKT TEEDIKAWCK GKIAHFKIPR YILFKKEYEF PLTVTGKVKK 600
  601 FEIREMSKIE LGLQQVVSHF SEL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 158.0
Match: 2p2bA
Description: No description for 2p2bA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle