| Protein: | rpb-12 |
| Organism: | Caenorhabditis elegans |
| Length: | 62 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for rpb-12.
| Description | E-value | Query Range |
Subject Range |
|
|
103.0 | [0..13] | [62..56] |
|
Region A: Residues: [1-62] |
1 11 21 31 41 51
| | | | | |
1 MDGSATPGPG QAHLKSNSMI YICGECHAEN EIKPKDAIRC RECGYRILYK KRCRKLMVYD 60
61 AR
|
| Detection Method: |  |
| Confidence: | 17.69897 |
| Match: | 1i3qL |
| Description: | RBP12 subunit of RNA polymerase II |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| DNA-directed RNA polymerase activity | 8.35451546352053 | bayes_pls_golite062009 |
| RNA polymerase activity | 8.35451546352053 | bayes_pls_golite062009 |
| nucleotidyltransferase activity | 5.81678585382781 | bayes_pls_golite062009 |
| transferase activity, transferring phosphorus-containing groups | 3.83767817856073 | bayes_pls_golite062009 |
| transferase activity | 3.42925067497401 | bayes_pls_golite062009 |
| binding | 1.92877642905827 | bayes_pls_golite062009 |
| catalytic activity | 0.67288476528593 | bayes_pls_golite062009 |
| protein binding | 0.404450175883241 | bayes_pls_golite062009 |
