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View Structure Prediction Details

Protein: CE20567
Organism: Caenorhabditis elegans
Length: 689 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE20567.

Description E-value Query
Range
Subject
Range
DYM_MOUSE - Dymeclin OS=Mus musculus GN=Dym PE=1 SV=1
736.0 [0..1] [687..1]

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Predicted Domain #1
Region A:
Residues: [1-134]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGSVITKETV LQENIYLKKL SGLEPVDDYD PFWNKLLSFS LKFDDDDEDT RIALESALDD  60
   61 HLQCLMYNTQ TTGNFAAFIR LFLRRATELK TSEQCENKIY LWQTSNALLI LRYIARFLTQ 120
  121 RMTEKEFVRI FAKS

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [135-265]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 HESTETESSS TSSSSDEEDD DEQKSENENN NGATKYIPIV FQNTAEEFTY ELVSILINIS  60
   61 VNETTLAIHV EAVRCLLTLL SSQLYNESIV NTSIVFRFFI DGSCAKHAAS LTKTLLLNYL 120
  121 IHNSEYHMTV Q

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [266-403]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KPQESIVFGL ASSMWSMVQM ATGIDSAEEE KKPPLTLGNL SILLLLNLSC HQPLNSSNPF  60
   61 KETLALFQNA QEVSTLPTQI VSFKIDYNGL YERLCATAGQ EPPMLLLYML LQANSGFRNY 120
  121 VLSRINLENL VVPVLRIL

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [404-477]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 HDGVATSNNS HHVYLALIVA LILSEDDIFC KIIHETMIKD LGWLDSDFSV REISLGGLTT  60
   61 LVLVRAIQKN ALKT

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #5
Region A:
Residues: [478-602]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RDRYLHTNCL AALANMSAFF KNLAPIVCQR LISLLDLLTK RHAKMVDHMR VSSQNDVADG  60
   61 QPINFHDDIT ALEEGIRTLL EIINSALCGG LRHNSHLIYN LLYHRALFDA YVQHPMFQDL 120
  121 LVNIA

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #6
Region A:
Residues: [603-689]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 AVISHFSSKV IHVPAGDGST MLQIIEKEAN IWPTDRLAKF PELKFRYVED EYTVDFFVPY  60
   61 VWRLSVQHSG IYFETSRIKI FNAQSIA

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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Created and Maintained by: Michael Riffle