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View Structure Prediction Details

Protein: pgl-2
Organism: Caenorhabditis elegans
Length: 532 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for pgl-2.

Description E-value Query
Range
Subject
Range
pgl-1 - status:Partially_confirmed UniProt:Q304E5 protein_id:ABB51171.1
663.0 [0..1] [414..42]

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Predicted Domain #1
Region A:
Residues: [1-213]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKPCKREIVD FDGIRTHFFP NLALYTCYNE ELIAHHSENA NRFTSYVFGA VEDSPTEQEI  60
   61 LEILFPENAN PEAISTGMDA CLALGENFLS HYKSFNARLN RQNHSHDLLD AVQEFDEKKI 120
  121 LAISRKSRLR KSADSKILTI LVNILLSENQ EEKFMEICEL CSLDLDFDAF VLIKILQLEN 180
  181 EENAEEVQII RENVVDQILE QKPFLAHLLK NGP

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [214-368]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 EKIDEITKLL SVPIIGSSSN QINQLITKIC DSSEISDTAV EEHYHQNFKL MNILVRTMIV  60
   61 DRFDLTIDAL EQIPVEIKNR MFPGIRIRVL QDTLHFLHQL FKVFLNESQK FDNLAPQSFA 120
  121 KAIKNVWVRH AIIGILDSLK FSLNKDVFNQ LVPLI

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [369-532]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PGSQVSNDVI SGKVENAISC AIWIVKTFGT EGSRDSIEKL PWFDSSVELT ELINSIEIAV  60
   61 TSVEVEDQTV NFRKIPQKDW LDGNLQKALK TEPTSEKFGI SNSLKIKDEN QRNQIRGFKD 120
  121 NSKEPNAKVS ARFGSKFQRV DSSTKRRLFG GVGVGEPRNC RGFL

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


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