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View Structure Prediction Details

Protein: CE20268
Organism: Caenorhabditis elegans
Length: 389 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE20268.

Description E-value Query
Range
Subject
Range
gi|7452552 - gi|7452552|pir||T15949 hypothetical protein F01F1.11 - Caenorhabditis elegans
426.0 [0..8] [373..26]

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Predicted Domain #1
Region A:
Residues: [1-175]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNRKRSKEDV GGFNDLPAKR PGTSQNSIRA ALEEKLERSP IEDLELQLEQ PEINVEEVGR  60
   61 IIADGIIEKT LDDEKLKELT LKFAKNVPTM ANISIWNLSE ELSTGTIDSR LVVIGNAFLW 120
  121 NLLKTSMSSI REKFENYKFK IHTMSATSSS LQSIDFSSSR IRAGEHCIQE TEIFR

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [176-257]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KMDLLEIYNS VVFRKSGDLN GKSKQIIKNY FAVACQPKCA IWHYSLRQSG TSHKKWLQDI  60
   61 PPHVVHTLLH FLICLAGLGA PE

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [258-389]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LDQTFEEATD SSDYVESLGD TNGAREVAFE TLKSTREQLC SKFRQCVTDA LNEAREMPYN  60
   61 TVTRELMAPP RGKPVDMHHC VTWRQYESLI RRCDTNPSKE NLEAKQDLDF KLMFTIYQPR 120
  121 ADDEEAEIDV KN

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


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