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View Structure Prediction Details

Protein: CE20268
Organism: Caenorhabditis elegans
Length: 389 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE20268.

Description E-value Query
Range
Subject
Range
gi|7452552 - gi|7452552|pir||T15949 hypothetical protein F01F1.11 - Caenorhabditis elegans
426.0 [0..8] [373..26]

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Predicted Domain #1
Region A:
Residues: [1-175]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNRKRSKEDV GGFNDLPAKR PGTSQNSIRA ALEEKLERSP IEDLELQLEQ PEINVEEVGR  60
   61 IIADGIIEKT LDDEKLKELT LKFAKNVPTM ANISIWNLSE ELSTGTIDSR LVVIGNAFLW 120
  121 NLLKTSMSSI REKFENYKFK IHTMSATSSS LQSIDFSSSR IRAGEHCIQE TEIFR

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [176-257]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KMDLLEIYNS VVFRKSGDLN GKSKQIIKNY FAVACQPKCA IWHYSLRQSG TSHKKWLQDI  60
   61 PPHVVHTLLH FLICLAGLGA PE

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [258-389]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LDQTFEEATD SSDYVESLGD TNGAREVAFE TLKSTREQLC SKFRQCVTDA LNEAREMPYN  60
   61 TVTRELMAPP RGKPVDMHHC VTWRQYESLI RRCDTNPSKE NLEAKQDLDF KLMFTIYQPR 120
  121 ADDEEAEIDV KN

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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Created and Maintained by: Michael Riffle