| Protein: | CE20215 |
| Organism: | Caenorhabditis elegans |
| Length: | 499 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE20215.
| Description | E-value | Query Range |
Subject Range |
|
|
206.0 | [0..22] | [460..699] |
|
Region A: Residues: [1-171] |
1 11 21 31 41 51
| | | | | |
1 MAPNRTPKQN FAIGEDITCV YKTHPYDATI IGIENNREGK ECYCVHFKGW NCRYDEKIVI 60
61 GEEKDRIFKG TVEDYYKKSH KTVVTAVVAG KQKQTASSSA DSNGTSSGAT EKAAKAPAAT 120
121 MRKSAKKVDE SSSEAADPKA KAEESSQNAL KVDPPLTTRK SSRTTTEATG A
|
| Detection Method: |  |
| Confidence: | 14.39794 |
| Match: | 2f5kA |
| Description: | No description for 2f5kA was found. |
| Term | Confidence | Notes |
| binding | 1.29119158874597 | bayes_pls_golite062009 |
| protein binding | 0.92128574628879 | bayes_pls_golite062009 |
| chromatin binding | 0.389299268964469 | bayes_pls_golite062009 |
|
Region A: Residues: [172-382] |
1 11 21 31 41 51
| | | | | |
1 MKRLTVAQET EDEAPKETVQ KKARIEPVDS AEESKAKGST APMRKSAKKV GESNSEATDP 60
61 EAKAKESSQS ALKVEPPLTT HNSSRKTVEA TGAMKRLTVA KETEDEALKS QKKARIEPVE 120
121 DASKAKGSAA PKSASSRAED GESSSTNDAA GTRFVIGELV ACTYKGKVYD AVITDIKPDK 180
181 DGKECYCIHF KGWNNRYDEQ IPIGEETDRI F
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [383-499] |
1 11 21 31 41 51
| | | | | |
1 KGIADGYRAP VVTMRKSARN HEKSTEPQAT KENAPRLVGK RREQFIIGEQ VTCTQNGKPY 60
61 DAYIVDIITD TDGKDFYCVH FKGWNSRYDE KIPVGEEQGR LFKGSAAKYA EMLEMKK
|
| Detection Method: | |
| Confidence: | 2.77 |
| Match: | 2f5kA |
| Description: | No description for 2f5kA was found. |
| Term | Confidence | Notes |
| binding | 1.18516426886327 | bayes_pls_golite062009 |
| protein binding | 0.807718911069571 | bayes_pls_golite062009 |
