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View Structure Prediction Details

Protein: oac-32
Organism: Caenorhabditis elegans
Length: 692 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for oac-32.

Description E-value Query
Range
Subject
Range
gi|157767996 - gi|157767996|ref|XP_001675819.1| Hypothetical protein CBG01998 [Caenorhabditis briggsae AF16]
gi|187037739, gi... - gi|39591012|emb|CAE58792.1| Hypothetical protein CBG01998 [Caenorhabditis briggsae], gi|187037739|em...
460.0 [0..14] [675..13]

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Predicted Domain #1
Region A:
Residues: [1-157]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MISQLIFLII LLLNIIPTTS ATWKDVIKPK PLDNLSAQCL NDTNTWINSL EIFGTLYAEC  60
   61 IIMKKCNAKE LKVLRDNLYA VQQLDAFGQF PGAGLLELKT LYDGSYQECQ RVSGKKYDVN 120
  121 YCYLLLTPGK NLPLRIAVCL PDSCNHQDMI DIFNELS

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [158-240]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PYPFTACSAY CTKNEVKKDT PFWGFSIFLI VMVVIAAIAS IVDYVRETVY GLSSQKENNT  60
   61 FFKILLTFSL WTNAELLLSV KEQ

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [241-461]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KSGFIKSLDC IRLLSMCWVV TGHSFLYLIL ADTLEPVLDF PTYFWNHLLL NAFVSVDTFF  60
   61 VLSGIVVAYL FFKTKLTKKT ITSPMTWILF YVHRYLRLTP PVMLFIGFFT VYTPYIQGAF 120
  121 SASELNQMAP QAAACKTLWW QNLLYINNFD DGNSQNSTCY GITWYLAVDT QLYLVAPIVL 180
  181 VALYFSFAAG TAIIVAGCVG SIITTYILFG VYNVPADIIG N

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [462-692]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GDQTKFFNIA YSKPWIRCPP YLVGLLTGYL LATYGSRKIR LNWALAIAGW ITAFVIAGFC  60
   61 LFATYDYDKG AHWSTFTRAT FYNFHRLGWG VFVCWVVGAN HMGWGGPIDK FMSHPIWQPF 120
  121 GRLSYCAYIV HWMVLYYYLN VGGVLHYSSA WQVFTYIAIP ATLLSYVLAF FWSCLFEVPI 180
  181 LKLEKMLIEK LIGGGGRTSL KVEDLGKNIG KVPDEEAENE KVQCEALRIN I

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


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