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View Structure Prediction Details

Protein: oac-32
Organism: Caenorhabditis elegans
Length: 692 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for oac-32.

Description E-value Query
Range
Subject
Range
gi|157767996 - gi|157767996|ref|XP_001675819.1| Hypothetical protein CBG01998 [Caenorhabditis briggsae AF16]
gi|187037739, gi... - gi|39591012|emb|CAE58792.1| Hypothetical protein CBG01998 [Caenorhabditis briggsae], gi|187037739|em...
460.0 [0..14] [675..13]

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Predicted Domain #1
Region A:
Residues: [1-157]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MISQLIFLII LLLNIIPTTS ATWKDVIKPK PLDNLSAQCL NDTNTWINSL EIFGTLYAEC  60
   61 IIMKKCNAKE LKVLRDNLYA VQQLDAFGQF PGAGLLELKT LYDGSYQECQ RVSGKKYDVN 120
  121 YCYLLLTPGK NLPLRIAVCL PDSCNHQDMI DIFNELS

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [158-240]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PYPFTACSAY CTKNEVKKDT PFWGFSIFLI VMVVIAAIAS IVDYVRETVY GLSSQKENNT  60
   61 FFKILLTFSL WTNAELLLSV KEQ

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [241-461]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KSGFIKSLDC IRLLSMCWVV TGHSFLYLIL ADTLEPVLDF PTYFWNHLLL NAFVSVDTFF  60
   61 VLSGIVVAYL FFKTKLTKKT ITSPMTWILF YVHRYLRLTP PVMLFIGFFT VYTPYIQGAF 120
  121 SASELNQMAP QAAACKTLWW QNLLYINNFD DGNSQNSTCY GITWYLAVDT QLYLVAPIVL 180
  181 VALYFSFAAG TAIIVAGCVG SIITTYILFG VYNVPADIIG N

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [462-692]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GDQTKFFNIA YSKPWIRCPP YLVGLLTGYL LATYGSRKIR LNWALAIAGW ITAFVIAGFC  60
   61 LFATYDYDKG AHWSTFTRAT FYNFHRLGWG VFVCWVVGAN HMGWGGPIDK FMSHPIWQPF 120
  121 GRLSYCAYIV HWMVLYYYLN VGGVLHYSSA WQVFTYIAIP ATLLSYVLAF FWSCLFEVPI 180
  181 LKLEKMLIEK LIGGGGRTSL KVEDLGKNIG KVPDEEAENE KVQCEALRIN I

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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