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View Structure Prediction Details

Protein: CE19832
Organism: Caenorhabditis elegans
Length: 290 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE19832.

Description E-value Query
Range
Subject
Range
gi|39582994, gi|... - gi|39582994|emb|CAE73059.1| Hypothetical protein CBG20429 [Caenorhabditis briggsae], gi|187023481|em...
222.0 [0..1] [265..1]
CE35612 - WBGene00011575 status:Partially_confirmed TR:Q22277 protein_id:CAA98280.2
202.0 [0..6] [289..16]
gi|220956504, gi... - gi|220956504|gb|ACL90795.1| CG6276-PA [synthetic construct], gi|220946940|gb|ACL86013.1| CG6276-PA [...
CG6276-PA - This gene is referred to in FlyBase by the symbol Dmel\CG6276 (CG6276, FBgn0038316). It is a protein...
185.0 [0..2] [283..23]

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Predicted Domain #1
Region A:
Residues: [1-159]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAQWTDPSRQ CLINAIRNRP VIWDKNYFGE SNYRTLKTSC LREVTSELNS MFQMPIKFTC  60
   61 EDVRSQWKNL KDTFVRKLRW VHEGKYMEDA MKEPTWKFYR MLTFLDEKEA KRLGDTCEHT 120
  121 YELAPNSTSC GQRAQISYEP TSTEEKMFQM FNNQPPPQL

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 0.958
Match: 2yumA
Description: No description for 2yumA was found.

Predicted Domain #2
Region A:
Residues: [160-244]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SQQSMIDSSQ IATCSNEPKM TSSSTFVTSS TSLKRGVHYS PTRSPNGSSS GLEEELEDED  60
   61 EQPGRKKSCR RQVSNIQPMQ VITTP

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [245-290]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PVAHQDEFDH FGAMVAANLR RIANEQGRMN ALRVQRRLYD ALFLDE

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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