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View Structure Prediction Details

Protein: CE19832
Organism: Caenorhabditis elegans
Length: 290 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE19832.

Description E-value Query
Range
Subject
Range
gi|39582994, gi|... - gi|39582994|emb|CAE73059.1| Hypothetical protein CBG20429 [Caenorhabditis briggsae], gi|187023481|em...
222.0 [0..1] [265..1]
CE35612 - WBGene00011575 status:Partially_confirmed TR:Q22277 protein_id:CAA98280.2
202.0 [0..6] [289..16]
gi|220956504, gi... - gi|220956504|gb|ACL90795.1| CG6276-PA [synthetic construct], gi|220946940|gb|ACL86013.1| CG6276-PA [...
CG6276-PA - This gene is referred to in FlyBase by the symbol Dmel\CG6276 (CG6276, FBgn0038316). It is a protein...
185.0 [0..2] [283..23]

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Predicted Domain #1
Region A:
Residues: [1-159]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAQWTDPSRQ CLINAIRNRP VIWDKNYFGE SNYRTLKTSC LREVTSELNS MFQMPIKFTC  60
   61 EDVRSQWKNL KDTFVRKLRW VHEGKYMEDA MKEPTWKFYR MLTFLDEKEA KRLGDTCEHT 120
  121 YELAPNSTSC GQRAQISYEP TSTEEKMFQM FNNQPPPQL

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 0.958
Match: 2yumA
Description: No description for 2yumA was found.

Predicted Domain #2
Region A:
Residues: [160-244]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SQQSMIDSSQ IATCSNEPKM TSSSTFVTSS TSLKRGVHYS PTRSPNGSSS GLEEELEDED  60
   61 EQPGRKKSCR RQVSNIQPMQ VITTP

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [245-290]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PVAHQDEFDH FGAMVAANLR RIANEQGRMN ALRVQRRLYD ALFLDE

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


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