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View Structure Prediction Details

Protein: CE19599
Organism: Caenorhabditis elegans
Length: 310 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE19599.

Description E-value Query
Range
Subject
Range
gi|157754078 - gi|157754078|ref|XP_001680751.1| Hypothetical protein CBG06974 [Caenorhabditis briggsae AF16]
gi|187033731, gi... - gi|39586864|emb|CAE62799.1| Hypothetical protein CBG06974 [Caenorhabditis briggsae], gi|187033731|em...
360.0 [0..1] [310..1]

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Predicted Domain #1
Region A:
Residues: [1-95]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASLAKNLKN VTPNVRRAVV TWDKAERIQR NEEIFKNSES VVHRLPEHYK TRYWETILSD  60
   61 KTPVHYRPPT SRFAHDSFKN VEIELEENPI IGIRT

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [96-176]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PEGDDGLWGG ERVVKGWIES APYTKKKILP RYWVPKLFFP ALKNVVLYSE ILDKYIKVTV  60
   61 TERAMRLIDE HFGLDYYILE S

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 21.69897
Match: 2qamZ
Description: No description for 2qamZ was found.

Predicted functions:

Term Confidence Notes
binding 0.349272864914483 bayes_pls_golite062009

Predicted Domain #3
Region A:
Residues: [177-310]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KEIDLDSKFA NSLKREMLLT LTTESYYEEN DEKKAYIKEK YADFVIPERE AEWIGLELNE  60
   61 AARKQQDMED STAPEPLKYK FEQSLLERLR DGTDEISQEL ENPEAPMKTE SKFGDKMFGK 120
  121 YLNPIGKKLR SATN

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.03
Match: 1bylA
Description: Bleomycin resistance protein, BRP
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
binding 0.179400531365986 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle