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View Structure Prediction Details

Protein: CE19599
Organism: Caenorhabditis elegans
Length: 310 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE19599.

Description E-value Query
Range
Subject
Range
gi|157754078 - gi|157754078|ref|XP_001680751.1| Hypothetical protein CBG06974 [Caenorhabditis briggsae AF16]
gi|187033731, gi... - gi|39586864|emb|CAE62799.1| Hypothetical protein CBG06974 [Caenorhabditis briggsae], gi|187033731|em...
360.0 [0..1] [310..1]

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Predicted Domain #1
Region A:
Residues: [1-95]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASLAKNLKN VTPNVRRAVV TWDKAERIQR NEEIFKNSES VVHRLPEHYK TRYWETILSD  60
   61 KTPVHYRPPT SRFAHDSFKN VEIELEENPI IGIRT

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [96-176]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PEGDDGLWGG ERVVKGWIES APYTKKKILP RYWVPKLFFP ALKNVVLYSE ILDKYIKVTV  60
   61 TERAMRLIDE HFGLDYYILE S

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 21.69897
Match: 2qamZ
Description: No description for 2qamZ was found.

Predicted functions:

Term Confidence Notes
binding 0.349272864914483 bayes_pls_golite062009

Predicted Domain #3
Region A:
Residues: [177-310]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KEIDLDSKFA NSLKREMLLT LTTESYYEEN DEKKAYIKEK YADFVIPERE AEWIGLELNE  60
   61 AARKQQDMED STAPEPLKYK FEQSLLERLR DGTDEISQEL ENPEAPMKTE SKFGDKMFGK 120
  121 YLNPIGKKLR SATN

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.03
Match: 1bylA
Description: Bleomycin resistance protein, BRP
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
binding 0.179400531365986 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle