| Protein: | hmit-1.2 |
| Organism: | Caenorhabditis elegans |
| Length: | 613 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for hmit-1.2.
| Description | E-value | Query Range |
Subject Range |
|
|
306.0 | [0..24] | [507..209] |
|
Region A: Residues: [1-467] |
1 11 21 31 41 51
| | | | | |
1 MVAVEFKVSE SGRPRPEKNP KLGFFVYLLG SAAIIGGFLF GYDTSVVSAA MLYVPEAPGL 60
61 KPMGTVWKEV IVSITPGMAA VGAWFSGAGS DRYGRKPIII GSTLIFVCGA VICAVAWTKI 120
121 VMLIGRIFLG VGIGFASMVV PVYLGEASPT HVRGTLVSAF AMMISFGQVV ANIMGGVFSY 180
181 WEPYTIGWRL MFAFAGIPAL IQFVCFIFLP ETPRWLYENG HTEQAEQVLE KIYGGNTEWI 240
241 EYELAEIKTY AEERQKQMEE EKKSGPVIWR ILKTPHVLKA CFIGSMLQAF QQLAGINTIL 300
301 YYTADIIRSA GIENYHTIIW ISVILSICNL IGPFAPMFFI EKLGRRKLFL FSCAGVVVSL 360
361 VLIGVSFLLV GNDSAPNFDR SAYLLAGNYQ SNGEAESCLM LSNCDSCVTS EHCGFCEDSE 420
421 TRTGFCLPVD HNDVTLYSST GLCTNGLDKS NSSFPNATSY VWQKHHC
|
| Detection Method: |  |
| Confidence: | 23.045757 |
| Match: | 1pw4A |
| Description: | Crystal Structure of the Glycerol-3-Phosphate Transporter from E.Coli |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| transporter activity | 4.09176719149278 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 3.59744164024479 | bayes_pls_golite062009 |
| transmembrane transporter activity | 3.5865018981083 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 3.54194478414824 | bayes_pls_golite062009 |
| hexose phosphate transmembrane transporter activity | 3.29248638217469 | bayes_pls_golite062009 |
| glucose-6-phosphate transmembrane transporter activity | 3.29248638217469 | bayes_pls_golite062009 |
| sugar:hydrogen symporter activity | 2.99050613058546 | bayes_pls_golite062009 |
| cation:sugar symporter activity | 2.99050613058546 | bayes_pls_golite062009 |
| carbohydrate transmembrane transporter activity | 2.62141276633776 | bayes_pls_golite062009 |
| sugar transmembrane transporter activity | 2.47557586092261 | bayes_pls_golite062009 |
| ion transmembrane transporter activity | 2.21266150105753 | bayes_pls_golite062009 |
| solute:hydrogen symporter activity | 2.10485633822652 | bayes_pls_golite062009 |
| cation transmembrane transporter activity | 1.79369588808394 | bayes_pls_golite062009 |
| monosaccharide transmembrane transporter activity | 1.6904339767429 | bayes_pls_golite062009 |
| active transmembrane transporter activity | 1.59419818573076 | bayes_pls_golite062009 |
| binding | 1.46605775041083 | bayes_pls_golite062009 |
| secondary active transmembrane transporter activity | 1.22264637452409 | bayes_pls_golite062009 |
| polyol transmembrane transporter activity | 0.924836669821548 | bayes_pls_golite062009 |
| alcohol transmembrane transporter activity | 0.924836669821548 | bayes_pls_golite062009 |
| glycerol transmembrane transporter activity | 0.812001619402678 | bayes_pls_golite062009 |
| symporter activity | 0.74591237387473 | bayes_pls_golite062009 |
| solute:cation symporter activity | 0.74591237387473 | bayes_pls_golite062009 |
|
Region A: Residues: [468-613] |
1 11 21 31 41 51
| | | | | |
1 TTSYTILPIV MMGVYLLTFS CGFTSLPWVL NSEFYPMWAR STCVSISTLS NWVFNLIIAL 60
61 TYLSLTHAIT KYGAFWLYAI FTIIAFIFIY FLVPETTGYS IDEVEMLFMN KRQRNIAMQA 120
121 RQAKLDAASD KDKNSSTSLS TETITM
|
| Detection Method: | |
| Confidence: | 1.21 |
| Match: | 1pw4A |
| Description: | Crystal Structure of the Glycerol-3-Phosphate Transporter from E.Coli |
| Matching Structure (courtesy of the PDB): |
|
