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View Structure Prediction Details

Protein: CE18634
Organism: Caenorhabditis elegans
Length: 601 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE18634.

Description E-value Query
Range
Subject
Range
gi|147905099, gi... - gi|39795632|gb|AAH63727.1| MGC68531 protein [Xenopus laevis], gi|147905099|ref|NP_001084389.1| hypot...
431.0 [0..9] [597..1]

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Predicted Domain #1
Region A:
Residues: [1-601]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNRYICEGDN PDITEERKKA SFNVDKLTEY YYGGEKRLKA RREVEKCVED HKELQDLKPT  60
   61 PFMSRDELID NSVRKLAGMA KNYKMIDLTN IEKTTYFLQL VHVRDSMAFS LHYLMFLPVL 120
  121 QSQASPEQLA EWMPRALSGT IIGTYAQTEM GHGTNLSKLE TTATYGQKTS EFVLHTPTIS 180
  181 GAKWWPGSLG KFCNFAIIVA NLWTNGVCVG PHPFLVQIRD LKTHKTLPNI KLGDIGPKLG 240
  241 SNGSDNGYLV FTNYRISRGN MLMRHSKVHP DGTYQKPPHS KLAYGGMVFV RSMMVRDIAN 300
  301 YLANAVTIAT RYSTVRRQGE PLPGAGEVKI LDYQTQQYRI LPYIAKTIAF RMAGEELQQA 360
  361 FLNISKDLRQ GNASLLPDLH SLSSGLKAVV TFEVQQGIEQ CRLACGGHGY SHASGIPELS 420
  421 AFSCGSCTYE GDNIVLLLQV ANECELYPEH EAWNRCSIEL CKAARWHVRL YIVRNFLQKV 480
  481 CTAPKDLQPV LRALSNLYIF DLQVSNKGHF MENGYMTSQQ IDQLKMGINE SLSTIRPDAV 540
  541 SIVDGFAIHE FELKSVLGRR DGNVYPGLFE WTKHSQLNNK EVHPAFDKYL TPIMDKIRAK 600
  601 M

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 118.0
Match: 1is2A
Description: Peroxisomal acyl-CoA oxidase-II, domains 3 and 4; Peroxisomal acyl-CoA oxidase-II, domains 1 and 2
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
oxidoreductase activity, acting on the CH-CH group of donors 3.82984575776371 bayes_pls_golite062009
acyl-CoA oxidase activity 2.93043515600013 bayes_pls_golite062009
oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor 1.75994759424671 bayes_pls_golite062009
catalytic activity 1.5145694518499 bayes_pls_golite062009
oxidoreductase activity 1.33309790431951 bayes_pls_golite062009
acyl-CoA dehydrogenase activity 0.00199306784016967 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle