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View Structure Prediction Details

Protein: CE18401
Organism: Caenorhabditis elegans
Length: 413 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE18401.

Description E-value Query
Range
Subject
Range
CE20754 - status:Partially_confirmed UniProt:Q20112 protein_id:CAA84663.1
565.0 [0..1] [413..1]

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Predicted Domain #1
Region A:
Residues: [1-188]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTEFESTEDQ KPTMLASLDH LSLRNWASPF EEASTPPTAS DDSFQSSSED NLSLRNWAPL  60
   61 SPNPETVKSA KSLRNYSTNP LIPSYICDLC ESPKTSELRV AYDAATFQTT YSYSIIWDVE 120
  121 MNDVEHYRKV METVSKSSAN SSRSSFGYFF EARPGMCRLL RTLHNYATDT SQASLADYMI 180
  181 ELSGRAPS

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [189-312]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PVVVKCGHYL CTACFDIVKN ADGTYGCSSQ QCYWKGSSRQ ESKKNYENDI CRKQRAKALG  60
   61 MKDLGIDVKP ASSASSNPIK ETSDSSSETN CSLSSGPVSF NHTMLNSLTP VAEHSVAIMM 120
  121 VLVE

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [313-413]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PLEVYGIVHS YVEMSFPLDT NLAKALGVML HRKKKILGDY VANGKLYFGF VNDDEKIGMR  60
   61 RIKSNYYDSL MVAEIPKFDD RVVLIFDVGD YVARGFKIYL K

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle