YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: dkf-2
Organism: Caenorhabditis elegans
Length: 220 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for dkf-2.

Description E-value Query
Range
Subject
Range
gi|157765766 - gi|157765766|ref|XP_001675226.1| Hypothetical protein CBG17106 [Caenorhabditis briggsae AF16]
gi|39580607, gi|... - gi|39580607|emb|CAE70503.1| Hypothetical protein CBG17106 [Caenorhabditis briggsae], gi|187025991|em...
295.0 [0..1] [214..1]
CE18967 - WBGene00012019 Phorbol esters\/diacylglycerol binding domain (C1 domain) (2 domains), serine\/threon...
107.0 [0..166] [216..701]

Back

Predicted Domain #1
Region A:
Residues: [1-164]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MILNILRLPH ADEPTTSQSV QDYPLVHFSP RRHQKFRTII SVGDSDVIKD SSLTDEELYN  60
   61 IIHASPIARK SSTVSSTDSG YLGSSGASSS CVRSREGSTV SSTITVERTR RGGSTASSEP 120
  121 DSVADSEGAG SYSSFSSIAS TASRMLGRAA DCLVLMTKRN GWSG

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [165-220]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DAGSPSDEKG SSLDAQSWTT AIQSALMPVT PQSSVVGGKR IDKLKVPTEG KTRPPY

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle